RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 LRCH1Q9Y2L9 728 aa9.46□□□□□ -0.9
SORT1-204ENST00000482236 PPIAL4AQ9Y536 164 aa9.46□□□□□ -0.9
SORT1-204ENST00000482236 AUP1Q9Y679 476 aa9.46□□□□□ -0.9
SORT1-204ENST00000482236 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.46□□□□□ -0.99e-7■□□□□ 8.5
SORT1-204ENST00000482236 ANXA2P2A6NMY6 339 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 MLNRO43193 412 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 GMDSO60547 372 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 TIPRLO75663 272 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 LYNP07948 512 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 PITPNBP48739 271 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 ZNF92Q03936 586 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 SNAPC1Q16533 368 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 CD300LDQ6UXZ3 194 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 C12orf54Q6X4T0 127 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 LRRC28Q86X40 367 aaPredicted RBP9.45□□□□□ -0.9
SORT1-204ENST00000482236 SPERTQ8NA61 448 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 DNAJC9Q8WXX5 260 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 C22orf15Q8WYQ4 148 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 ERGIC1Q969X5 290 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 REEP6Q96HR9 211 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 SLC6A7Q99884 636 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 PNRC2Q9NPJ4 139 aaKnown RBP9.45□□□□□ -0.9
SORT1-204ENST00000482236 TRIM36Q9NQ86 728 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 G6PC2Q9NQR9 355 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 C1orf123Q9NWV4 160 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 TVP23BQ9NYZ1 205 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 CLN8Q9UBY8 286 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 POMPQ9Y244 141 aa9.45□□□□□ -0.9
SORT1-204ENST00000482236 A0A0A6YYJ9 748 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 C3orf80F5H4A9 247 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 PRODHO43272 600 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 SELENOFO60613 162 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 FAM20BO75063 409 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 ATP5HO75947 161 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 MRPL3P09001 348 aaKnown RBP9.44□□□□□ -0.9
SORT1-204ENST00000482236 PRKACGP22612 351 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 CD80P33681 288 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 RBMXP38159 391 aaKnown RBP9.44□□□□□ -0.9
SORT1-204ENST00000482236 SEC61A1P61619 476 aaKnown RBP9.44□□□□□ -0.9
SORT1-204ENST00000482236 COLCA1Q6ZS62 124 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 KLBQ86Z14 1044 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 CPOQ8IVL8 374 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 HS3ST5Q8IZT8 346 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 CELF2-AS1Q8N7Q2 184 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 C19orf18Q8NEA5 215 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 OR52H1Q8NGJ2 320 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 OR10S1Q8NGN2 331 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 ZNRF4Q8WWF5 429 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 GCDHQ92947 438 aaPredicted RBP9.44□□□□□ -0.9
SORT1-204ENST00000482236 HIST1H2AAQ96QV6 131 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 ABHD6Q9BV23 337 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 TMPRSS13Q9BYE2 586 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 MS4A7Q9GZW8 240 aaPredicted RBP9.44□□□□□ -0.9
SORT1-204ENST00000482236 KRT84Q9NSB2 600 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 MRPL15Q9P015 296 aaKnown RBP9.44□□□□□ -0.9
SORT1-204ENST00000482236 ERVK-18Q9QC07 812 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 RNF7Q9UBF6 113 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 ENOPH1Q9UHY7 261 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 IKZF2Q9UKS7 526 aa9.44□□□□□ -0.9
SORT1-204ENST00000482236 FCGR1AP12314 374 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 DDOSTP39656 456 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 CD200P41217 278 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 ZNF121P58317 390 aaPredicted RBP9.43□□□□□ -0.9
SORT1-204ENST00000482236 GMFBP60983 142 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 ZNF154Q13106 437 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 APOFQ13790 326 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 SLC35D3Q5M8T2 416 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 FAM201AQ5SY85 155 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 SFRP4Q6FHJ7 346 aaPredicted RBP9.43□□□□□ -0.9
SORT1-204ENST00000482236 LRRN1Q6UXK5 716 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 DCDC5Q6ZRR9 648 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 TMEM179BQ7Z7N9 219 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 TIGD4Q8IY51 512 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 MICU1Q9BPX6 476 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 TMEM246Q9BRR3 403 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 NMNAT2Q9BZQ4 307 aa9.43□□□□□ -0.9
SORT1-204ENST00000482236 IGHV3OR16-10A0A075B7F0 116 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 TRAV38-1A0A0B4J264 116 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 G3V2T6 193 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 ADAM20O43506 726 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 FASP25445 335 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 ZFP36P26651 326 aaKnown RBP9.42□□□□□ -0.9
SORT1-204ENST00000482236 ATP6V1E1P36543 226 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 IL5RAQ01344 420 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 ZNF181Q2M3W8 571 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 KRTAP27-1Q3LI81 207 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 ZNF404Q494X3 552 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 TEX30Q5JUR7 227 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 TMEM236Q5W0B7 351 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 KCTD18Q6PI47 426 aaPredicted RBP9.42□□□□□ -0.9
SORT1-204ENST00000482236 SLC16A9Q7RTY1 509 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 THAP5Q7Z6K1 395 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 ZDHHC13Q8IUH4 622 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.42□□□□□ -0.9
SORT1-204ENST00000482236 CSNK2A3Q8NEV1 391 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 OR5K1Q8NHB7 308 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 RNF133Q8WVZ7 376 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 SIGLEC11Q96RL6 698 aa9.42□□□□□ -0.9
SORT1-204ENST00000482236 CNN2Q99439 309 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms