RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.15□□□□□ -0.79
SMPD4-218ENST00000482171 GJC3Q8NFK1 279 aa10.15□□□□□ -0.79
SMPD4-218ENST00000482171 GFOD1Q9NXC2 390 aa10.15□□□□□ -0.79
SMPD4-218ENST00000482171 EHFQ9NZC4 300 aa10.15□□□□□ -0.79
SMPD4-218ENST00000482171 FBXO4Q9UKT5 387 aa10.15□□□□□ -0.79
SMPD4-218ENST00000482171 PCDHB10Q9UN67 800 aa10.15□□□□□ -0.79
SMPD4-218ENST00000482171 ZNF318Q5VUA4 2279 aa10.15□□□□□ -0.79
SMPD4-218ENST00000482171 MTCL1Q9Y4B5 1905 aaKnown RBP10.15□□□□□ -0.79
SMPD4-218ENST00000482171 PTPRDP23468 1912 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 TXNDC12O95881 172 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 GALP22466 123 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 CX3CR1P49238 355 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 SLC17A1Q14916 467 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 PDZD11Q5EBL8 140 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 ZNF770Q6IQ21 691 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 STAC2Q6ZMT1 411 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 MEX3BQ6ZN04 569 aaKnown RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 C9orf40Q8IXQ3 194 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 LRFN5Q96NI6 719 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 ADGRL4Q9HBW9 690 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 LUZP4Q9P127 313 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 UBE2J1Q9Y385 318 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 TSC2P49815 1807 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 ANKUB1A6NFN9 424 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 GPR31O00270 319 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 ZFPL1O95159 310 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 HOXB9P17482 250 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 CSF2RBP32927 897 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 RAG2P55895 527 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 ARF1P84077 181 aaKnown RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 IL11RAQ14626 422 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 PPA1Q15181 289 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 PLA1AQ53H76 456 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 HSD17B11Q8NBQ5 300 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 NANOS1Q8WY41 292 aaKnown RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 GPR137Q96N19 417 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 PURGQ9UJV8 347 aaKnown RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 C17orf51A8MQB3 221 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 KLRC4-KLRK1H3BQV0 150 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 CTLA4P16410 223 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 CTRB1P17538 263 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 BLVRBP30043 206 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 CLDN15P56746 228 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 CTRB2Q6GPI1 263 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 MUC20Q8N307 709 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-218ENST00000482171 OR11H4Q8NGC9 324 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 SCGB1C1Q8TD33 95 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 TSPAN32Q96QS1 320 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 SARGQ9BW04 601 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 KCNE5Q9UJ90 142 aa10.14□□□□□ -0.79
SMPD4-218ENST00000482171 IMPA2O14732 288 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 ARPC3O15145 178 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 ZNF44P15621 663 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 PI3P19957 117 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 RRADP55042 308 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 PCBD1P61457 104 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SSX2Q16385 188 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SOHLH1Q5JUK2 328 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 WDR74Q6RFH5 385 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 VHLLQ6RSH7 139 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 FIP1L1Q6UN15 594 aaKnown RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 BAP18Q8IXM2 172 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 CCDC54Q8NEL0 328 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 OR52N5Q8NH56 324 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SGCZQ96LD1 299 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 GPR84Q9NQS5 396 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SPTBN1Q01082 2364 aaKnown RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 PLPP2O43688 288 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 NDUFB6O95139 128 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 LIMS1P48059 325 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 BAMBIQ13145 260 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 KIAA0141Q14154 515 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 EIF2S3LQ2VIR3 472 aaKnown RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 PMS2CLQ68D20 193 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 GLIPR1L1Q6UWM5 242 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SULF2Q8IWU5 870 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 ZSCAN4Q8NAM6 433 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 BVESQ8NE79 360 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 DEFB124Q8NES8 71 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 C11orf40Q8WZ69 217 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 ZNF501Q96CX3 271 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SCARF2Q96GP6 870 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 RASL10BQ96S79 203 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 CCDC86Q9H6F5 360 aaKnown RBP10.13□□□□□ -0.79
SMPD4-218ENST00000482171 TRAV1-2A0A0B4J238 106 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 LOC105371267A0A1B0GV96 52 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 ZNF98A6NK75 572 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 M0R296 226 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 BHLHE40O14503 412 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 B4GALT1P15291 398 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 MSR1P21757 451 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 AVPR2P30518 371 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SERPINF1P36955 418 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 TMEM91Q6ZNR0 172 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 SLC16A13Q7RTY0 426 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 IL1F10Q8WWZ1 152 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 RAB3CQ96E17 227 aa10.13□□□□□ -0.79
SMPD4-218ENST00000482171 GHITMQ9H3K2 345 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms