RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PGA3P0DJD8 388 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 PPP3CBP16298 524 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 PAICSP22234 425 aaKnown RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 MPGP29372 298 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CRABP1P29762 137 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 GRK5P34947 590 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 SOX6P35712 828 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 MEOX2P50222 304 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 DAPP51397 102 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 UBE2NP61088 152 aaKnown RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 RAP2BP61225 183 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF91Q05481 1191 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 SCN1BQ07699 218 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 DAG1Q14118 895 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 AANATQ16613 207 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 PGGHGQ32M88 737 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CLEC12AQ5QGZ9 265 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 THEM4Q5T1C6 240 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 HES5Q5TA89 166 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 TSPO2Q5TGU0 170 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 FAHD1Q6P587 224 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 TEX261Q6UWH6 196 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 BHLHA15Q7RTS1 189 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 LHFPL3Q86UP9 236 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 C20orf196Q8IYI0 205 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 HS3ST5Q8IZT8 346 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 TMEM123Q8N131 208 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 C17orf78Q8N4C9 275 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 PARP16Q8N5Y8 322 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 OR2C3Q8N628 320 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ARIH2OSQ8N7S6 290 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ZIC4Q8N9L1 334 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 LRRC75AQ8NAA5 344 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF555Q8NEP9 628 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 OR52H1Q8NGJ2 320 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 NDNFQ8TB73 568 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CYGBQ8WWM9 190 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 TMEM54Q969K7 222 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 LGALS12Q96DT0 336 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 Q96M85 177 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ALKBH3Q96Q83 286 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 SLC38A2Q96QD8 506 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 TSPAN32Q96QS1 320 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 GPA33Q99795 319 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF251Q9BRH9 671 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 NRIP3Q9NQ35 241 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 SLC7A10Q9NS82 523 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 MCUBQ9NWR8 336 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 COA4Q9NYJ1 87 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 MALT1Q9UDY8 824 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 IL20RAQ9UHF4 553 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CYB5R1Q9UHQ9 305 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 U3KQ87 197 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CHD6Q8TD26 2715 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 RP1L1Q8IWN7 2480 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF462Q96JM2 2506 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 A0A1B0GW55 424 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 LOC390937A0A1W2PQ73 354 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 PRSS37A4D1T9 235 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CLEC18AA5D8T8 446 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CCDC182A6NF36 153 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 B5MCH6 92 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 RPL36A-HNRNPH2H7BZ11 118 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 PSMD9O00233 223 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SLC1A7O00341 560 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 EI24O14681 340 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CASKO14936 926 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 UPK3AO75631 287 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 RAD51DO75771 328 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 LYZL6O75951 148 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 TXNDC12O95881 172 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ALPLP05186 524 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 QDPRP09417 244 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DUX4L2P0CJ85 424 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DUX4L3P0CJ86 424 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DUX4L4P0CJ87 422 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DUX4L5P0CJ88 424 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DUX4L6P0CJ89 424 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DUX4L7P0CJ90 424 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 HIST1H1CP16403 213 aaKnown RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 NPR2P20594 1047 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 PSMB1P20618 241 aaKnown RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 COX5AP20674 150 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 IGHV1-2P23083 117 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 TNFSF4P23510 183 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 S100PP25815 95 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 POLR2IP36954 125 aaKnown RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CRISP1P54107 249 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SLC35A2P78381 396 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 FHL1Q13642 323 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 KEAP1Q14145 624 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 TBCEQ15813 527 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CEACAM16Q2WEN9 425 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 Q5BKY6 102 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 MESTQ5EB52 335 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ARMC4Q5T2S8 1044 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 LEG1Q6P5S2 330 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ANKRD16Q6P6B7 361 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF474Q6S9Z5 364 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CLEC18BQ6UXF7 455 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms