RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 CLDN24A6NM45 220 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 ANKRD65E5RJM6 399 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 F5H5K5 113 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 C15orf65H3BRN8 121 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 MGRN1O60291 552 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 SMIM24O75264 130 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 EIF3GO75821 320 aaKnown RBP eCLIP4.79□□□□□ -1.64
RC3H1-204ENST00000479099 PMS2P2O95744 297 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 PTTG1O95997 202 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 HAND1O96004 215 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 PAK4O96013 591 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-204ENST00000479099 PPBPP02775 128 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 CDH1P12830 882 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 ICAM2P13598 275 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 FCGR2CP31995 323 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 GPX4P36969 197 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-204ENST00000479099 GALR1P47211 349 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 TTPAP49638 278 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 GSK3BP49841 420 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 AP1S2P56377 157 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 AP1S1P61966 158 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 RPL32P62910 135 aaKnown RBP4.79□□□□□ -1.64
RC3H1-204ENST00000479099 PTGR1Q14914 329 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 P2RY6Q15077 328 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 LRRC26Q2I0M4 334 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 HLA-DRB5Q30154 266 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 UBE2UQ5VVX9 321 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 C10orf107Q8IVU9 208 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 CLDN22Q8N7P3 220 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 ZNF114Q8NC26 417 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 STOML3Q8TAV4 291 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 ARPC1AQ92747 370 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 SARAFQ96BY9 339 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 ZMYND19Q96E35 227 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-204ENST00000479099 TCEAL4Q96EI5 215 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 MRAP2Q96G30 205 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 SFRP2Q96HF1 295 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 ZNF597Q96LX8 424 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 RARRES2Q99969 163 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 C20orf144Q9BQM9 153 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 ABCC13Q9NSE7 274 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 FAM206AQ9NX38 181 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 TAS2R13Q9NYV9 303 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 TREM2Q9NZC2 230 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 SNX10Q9Y5X0 201 aa4.79□□□□□ -1.64
RC3H1-204ENST00000479099 IGLV5-45A0A087WSX0 123 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 IGHV4-61A0A0C4DH41 118 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 NCBP2LA6PVI3 153 aaKnown RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 CEACAM18A8MTB9 384 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 MIF4GDA9UHW6 222 aaKnown RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 TNFRSF11BO00300 401 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 GABRPO00591 440 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 NUPL2O15504 423 aaKnown RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 MED6O75586 246 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 BCAR3O75815 825 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 IGHV4-59P01825 116 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 PCCAP05165 728 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 SCGB1A1P11684 91 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 PAX1P15863 534 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 USF1P22415 310 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 IGFBP5P24593 272 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 SHC1P29353 583 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 RPL12P30050 165 aaKnown RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 HOXA1P49639 335 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 GPM6AP51674 278 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 TCL1AP56279 114 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 RAB38P57729 211 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 MRPS11P82912 194 aaKnown RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 CLINT1Q14677 625 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 OR7A5Q15622 319 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 HIST3H3Q16695 136 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 DEFB115Q30KQ5 88 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 PARP15Q460N3 678 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 OLFML2AQ68BL7 652 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 CYHR1Q6ZMK1 362 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 DHFR2Q86XF0 187 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 APLFQ8IW19 511 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 GPD1LQ8N335 351 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 GATD1Q8NB37 220 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 OR11H1Q8NG94 326 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 OR2A1Q8NGT9 310 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 OR11H2Q8NH07 326 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 OR2T6Q8NHC8 308 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 RFESDQ8TAC1 157 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 ZNF564Q8TBZ8 553 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 FGF11Q92914 225 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 UGT1A8Q9HAW9 530 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 EXOSC3Q9NQT5 275 aaKnown RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 VPS29Q9UBQ0 182 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 MLXQ9UH92 298 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 VPREB3Q9UKI3 123 aa4.78□□□□□ -1.64
RC3H1-204ENST00000479099 MRPS18CQ9Y3D5 142 aaKnown RBP4.78□□□□□ -1.64
RC3H1-204ENST00000479099 IGHV2OR16-5A0A0B4J2B6 119 aa4.77□□□□□ -1.65
RC3H1-204ENST00000479099 TRBV5-4A0A0C4DH59 114 aa4.77□□□□□ -1.65
RC3H1-204ENST00000479099 A0A1B0GVT2 93 aa4.77□□□□□ -1.65
RC3H1-204ENST00000479099 MBTPS2O43462 519 aa4.77□□□□□ -1.65
RC3H1-204ENST00000479099 FRAT2O75474 233 aaPredicted RBP4.77□□□□□ -1.65
RC3H1-204ENST00000479099 CLDN1O95832 211 aa4.77□□□□□ -1.65
RC3H1-204ENST00000479099 FCGR3AP08637 254 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms