RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RIDAP52758 137 aaKnown RBP12.37□□□□□ -0.43
USP11-207ENST00000478596 RIN1Q13671 783 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 ARL9Q6T311 187 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 ST7LQ8TDW4 575 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 IPCEF1Q8WWN9 437 aaPredicted RBP12.37□□□□□ -0.43
USP11-207ENST00000478596 BOD1Q96IK1 185 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 MAP6Q96JE9 813 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 COQ7Q99807 217 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 OR51B6Q9H340 312 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 INPP5EQ9NRR6 644 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 PLCXD1Q9NUJ7 323 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 B3GNT2Q9NY97 397 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 UBAP1Q9NZ09 502 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 EIF3KQ9UBQ5 218 aaKnown RBP12.37□□□□□ -0.43
USP11-207ENST00000478596 PSORS1C1Q9UIG5 152 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 PCDHGB5Q9Y5G0 923 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 N6AMT1Q9Y5N5 214 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 SNX5Q9Y5X3 404 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 ABHD16AO95870 558 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 SERPINA5P05154 406 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 ANXA2P07355 339 aaKnown RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 CCL2P13500 99 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 DAOP14920 347 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 ZNF14P17017 642 aaPredicted RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 ALOX5APP20292 161 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 DCKP27707 260 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 CX3CR1P49238 355 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 PRKXP51817 358 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 TPTEP56180 551 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 GABARAPL2P60520 117 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 ZNF829Q3KNS6 432 aaPredicted RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 TP53I3Q53FA7 332 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 CCDC92Q53HC0 331 aaPredicted RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 TMPRSS11AQ6ZMR5 421 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 PLEKHG7Q6ZR37 379 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 C1orf229Q6ZS94 237 aaPredicted RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 LHFPL3Q86UP9 236 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 KLHL36Q8N4N3 616 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 RNF133Q8WVZ7 376 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 GGHQ92820 318 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 AMELYQ99218 206 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 BRD7Q9NPI1 651 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 DDX28Q9NUL7 540 aaKnown RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 ATPIF1Q9UII2 106 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 DIMT1Q9UNQ2 313 aaKnown RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 EXOGQ9Y2C4 368 aaKnown RBP12.36□□□□□ -0.43
USP11-207ENST00000478596 LRRC42Q9Y546 428 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 LRP12Q9Y561 859 aa12.36□□□□□ -0.43
USP11-207ENST00000478596 J3QLW9 94 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 M0R135 149 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 TBX1O43435 398 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 SYNGR3O43761 229 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 RPP14O95059 124 aaKnown RBP12.35□□□□□ -0.43
USP11-207ENST00000478596 TNFAIP8O95379 198 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 IGKV3-15P01624 115 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 IGHA1P01876 353 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 APOC1P02654 83 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 MSMBP08118 114 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 COX5BP10606 129 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 ZNF19P17023 458 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 CRHBPP24387 322 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 SERPINF1P36955 418 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 PPOXP50336 477 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 EGR3Q06889 387 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 PCK2Q16822 640 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 LAIR2Q6ISS4 152 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 UNQ6126/PRO20091Q6UXV3 157 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 SSX6Q7RTT6 188 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 MYPOPQ86VE0 399 aaPredicted RBP12.35□□□□□ -0.43
USP11-207ENST00000478596 COMMD2Q86X83 199 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 SLC7A6Q92536 515 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 ZNF799Q96GE5 643 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 C4orf36Q96KX1 117 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 OR8B4Q96RC9 309 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 RAB1BQ9H0U4 201 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 FGF20Q9NP95 211 aaPredicted RBP12.35□□□□□ -0.43
USP11-207ENST00000478596 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP11-207ENST00000478596 ERVK13-1Q9NX77 482 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 SLCO1C1Q9NYB5 712 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 ERVK-18Q9QC07 812 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 ERGIC3Q9Y282 383 aa12.35□□□□□ -0.43
USP11-207ENST00000478596 METTL15A6NJ78 407 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 B9A039 149 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 CDK1P06493 297 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 DBHP09172 617 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 FAM157BP0CG42 384 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 OPRL1P41146 370 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 HIST1H3AP68431 136 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 IL13RA1P78552 427 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 NAAAQ02083 359 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 ZNF85Q03923 595 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 GALEQ14376 348 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 GFOD2Q3B7J2 385 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 C3orf36Q3SXR2 165 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 HIST2H3PS2Q5TEC6 136 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 HIST2H3AQ71DI3 136 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 ZNF679Q8IYX0 411 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 SVOPQ8N4V2 548 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms