RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 DHHO43323 396 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 STK17BO94768 372 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 KLK2P20151 261 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 MRPS34P82930 218 aaKnown RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 LPCAT3Q6P1A2 487 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 GALNT16Q8N428 558 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 FTMTQ8N4E7 242 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 ZIC4Q8N9L1 334 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 GNRHR2Q96P88 292 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 PADI1Q9ULC6 663 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 TMEM82A0PJX8 343 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 OPN1LWP04000 364 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 PTPRBP23467 1997 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 GUCA1AP43080 201 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF81P51508 661 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 TSPAN5P62079 268 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 PNLIPRP3Q17RR3 467 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 CLLU1Q5K131 121 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 C6orf183Q5T699 404 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 C6orf15Q6UXA7 325 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 IDO2Q6ZQW0 420 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 ABHD12BQ7Z5M8 362 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 FJX1Q86VR8 437 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 NAXDQ8IW45 347 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 MUC20Q8N307 709 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 OR13C9Q8NGT0 318 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 KCNG3Q8TAE7 436 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 PLEKHA6Q9Y2H5 1048 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 VPS13AQ96RL7 3174 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 HLA-GP17693 338 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ECH1Q13011 328 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 PHYHD1Q5SRE7 291 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 FAM27BQ5VT28 67 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 POFUT1Q9H488 388 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF319Q9P2F9 582 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 A0A0J9YW62 118 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 TEX51A0A1B0GUA7 166 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 MPC2O95563 127 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 P04436 131 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 SERPINA7P05543 415 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 OR4E1P0C645 316 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF84P51523 738 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 GK2Q14410 553 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-212ENST00000477970 KRTAP27-1Q3LI81 207 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 CDNFQ49AH0 187 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ACTBL2Q562R1 376 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 CLVS2Q5SYC1 327 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 AWAT2Q6E213 333 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ABLIM2Q6H8Q1 611 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ANGPTL5Q86XS5 388 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF283Q8N7M2 679 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ACBD4Q8NC06 268 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 OR52B4Q8NGK2 314 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 ANGPTL6Q8NI99 470 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 PP6455Q8WZ26 134 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 TAAR9Q96RI9 348 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 CDC6Q99741 560 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 STRADBQ9C0K7 418 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 LPAR5Q9H1C0 372 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 LOXL2Q9Y4K0 774 aa10.75□□□□□ -0.69
PTPRF-212ENST00000477970 MEIS3P1A6NDR6 274 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 TMEM235A6NFC5 223 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 F5H5P2 479 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 NOS1APO75052 506 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 AMY2AP04746 511 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 RLN1P04808 185 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 CASRP41180 1078 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 TRAPPC6BQ86SZ2 158 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 BPIFB2Q8N4F0 458 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 OR13C8Q8NGS7 320 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 DVL3Q92997 716 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 ADGRG7Q96K78 797 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF385AQ96PM9 386 aaKnown RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 TINAGL1Q9GZM7 467 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 MRPS28Q9Y2Q9 187 aaKnown RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 LINC01387J3KSC0 135 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 M0R233 179 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 SMAD9O15198 467 aaKnown RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 IL2RAP01589 272 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 NFYAP23511 347 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 H2BFSP57053 126 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 Q0VFX4 171 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 ATPAF1Q5TC12 328 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 OR10K2Q6IF99 312 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 GGNQ86UU5 652 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 FAM89BQ8N5H3 189 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 OR8S1Q8NH09 359 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 B3GNT4Q9C0J1 378 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 MCRIP1C9JLW8 97 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 CDC14BO60729 498 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 CA11O75493 328 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 DHRS3O75911 302 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 CD8AP01732 235 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 CST2P09228 141 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 PRKXP51817 358 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 ESCO2Q56NI9 601 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 B3GNTL1Q67FW5 361 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 FAM57BQ71RH2 274 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms