RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 IRF3Q14653 427 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 HLXQ14774 488 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 PCGF3Q3KNV8 242 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 SPRNQ5BIV9 151 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF362Q5T0B9 420 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 AVPI1Q5T686 147 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 HIST2H3PS2Q5TEC6 136 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 UBE2UQ5VVX9 321 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 FAM166AQ6J272 317 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 SLC18B1Q6NT16 456 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 LYPD4Q6UWN0 246 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 CFAP77Q6ZQR2 320 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 HIST2H3AQ71DI3 136 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF367Q7RTV3 350 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ZBTB46Q86UZ6 589 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 SATL1Q86VE3 508 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 OR5AS1Q8N127 324 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 PROKR2Q8NFJ6 384 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 BBS1Q8NFJ9 593 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 OR52I1Q8NGK6 324 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 OR2AJ1Q8NGZ0 328 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 OR2T4Q8NH00 348 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 SGCDQ92629 289 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 PTP4A1Q93096 173 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 MUL1Q969V5 352 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 LGALS12Q96DT0 336 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 SIGLEC11Q96RL6 698 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 DDOQ99489 341 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 TEAD3Q99594 435 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 REPIN1Q9BWE0 567 aaKnown RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 MND1Q9BWT6 205 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 JAM3Q9BX67 310 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 WDR76Q9H967 626 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ACOT13Q9NPJ3 140 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 INPP5EQ9NRR6 644 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 TBCCD1Q9NVR7 557 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 MRPL22Q9NWU5 206 aaKnown RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 EXOGQ9Y2C4 368 aaKnown RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 COMMD3-BMI1R4GMX3 469 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ABCA2Q9BZC7 2435 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CUBNO60494 3623 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 IGHV1-69-2A0A0G2JMI3 117 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CCDC182A6NF36 153 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 F5H5K5 113 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 ICMTO60725 284 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 GLCEO94923 617 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CLUP10909 449 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF823P16415 610 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 SPI1P17947 270 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 PSMB9P28065 219 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CRYBB2P43320 205 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 MAP2K4P45985 399 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 GTF2A1P52655 376 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-221ENST00000477561 TMEM33P57088 247 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 RSPO1Q2MKA7 263 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CHRFAM7AQ494W8 412 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 XAF1Q6GPH4 301 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 NAA40Q86UY6 237 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 C1orf174Q8IYL3 243 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF511Q8NB15 262 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 OR51G2Q8NGK0 314 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 OR13F1Q8NGS4 319 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CLDND2Q8NHS1 167 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CCL17Q92583 94 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 MRPL48Q96GC5 212 aaKnown RBP7.03□□□□□ -1.28
HDAC6-221ENST00000477561 MAP6Q96JE9 813 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CNN2Q99439 309 aaKnown RBP7.03□□□□□ -1.28
HDAC6-221ENST00000477561 COQ7Q99807 217 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 BEX2Q9BXY8 128 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 NMNAT2Q9BZQ4 307 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 HDHD2Q9H0R4 259 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 MED20Q9H944 212 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 SAP30LQ9HAJ7 183 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 LPAR2Q9HBW0 351 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 NKIRAS2Q9NYR9 191 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CYB5R1Q9UHQ9 305 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 PURGQ9UJV8 347 aaKnown RBP7.03□□□□□ -1.28
HDAC6-221ENST00000477561 KCNS2Q9ULS6 477 aa7.03□□□□□ -1.28
HDAC6-221ENST00000477561 SONP18583 2426 aaKnown RBP7.03□□□□□ -1.28
HDAC6-221ENST00000477561 CHD3Q12873 2000 aaKnown RBP7.03□□□□□ -1.28
HDAC6-221ENST00000477561 YLPM1P49750 1951 aaKnown RBP7.02□□□□□ -1.29
HDAC6-221ENST00000477561 CCDC160A6NGH7 325 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 IGHA1P01876 353 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 SPARCP09486 303 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 SBK2P0C263 348 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 PSKH1P11801 424 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 GSTT1P30711 240 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 MRPS11P82912 194 aaKnown RBP7.02□□□□□ -1.29
HDAC6-221ENST00000477561 TNFAIP6P98066 277 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-221ENST00000477561 MED22Q15528 200 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 HFEQ30201 348 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 FAM209AQ5JX71 171 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 FAM120AOSQ5T036 256 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 SYT6Q5T7P8 510 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-221ENST00000477561 OR2T2Q6IF00 324 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 TMPRSS11AQ6ZMR5 421 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 Q6ZR03 302 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 SPATC1Q76KD6 591 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 KLHL36Q8N4N3 616 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms