RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ZNF626Q68DY1 528 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 CATSPERDQ86XM0 798 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 SVBPQ8N300 66 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 CNEP1R1Q8N9A8 125 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 TMEM178AQ8NBL3 297 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 OR1J2Q8NGS2 313 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 EMG1Q92979 244 aaKnown RBP13.07□□□□□ -0.32
HDAC6-220ENST00000477528 ZNF501Q96CX3 271 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-220ENST00000477528 GNRHR2Q96P88 292 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 ENY2Q9NPA8 101 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 CABIN1Q9Y6J0 2220 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 NRASP01111 189 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 IGF2P01344 180 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 SNRPNP63162 240 aaKnown RBP13.07□□□□□ -0.32
HDAC6-220ENST00000477528 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.07□□□□□ -0.32
HDAC6-220ENST00000477528 OR2V1Q8NHB1 315 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 LUZP4Q9P127 313 aa13.07□□□□□ -0.32
HDAC6-220ENST00000477528 TRAV8-7A0A075B6U6 113 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 SDCBPO00560 298 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-220ENST00000477528 FAHP16930 419 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 FAM181AQ8N9Y4 354 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 OR10AC1Q8NH08 325 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 OR6S1Q8NH40 331 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 OR6X1Q8NH79 312 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 RASL10BQ96S79 203 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC6-220ENST00000477528 CSAG2Q9Y5P2 127 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 CD300LBA8K4G0 201 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 XRCC2O43543 280 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 ACSM4P0C7M7 580 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 TERB2Q8NHR7 220 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 SECTM1Q8WVN6 248 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 WDR89Q96FK6 387 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-220ENST00000477528 IP6K3Q96PC2 410 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 OCSTAMPQ9BR26 566 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 ZNF2Q9BSG1 426 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-220ENST00000477528 KLHDC2Q9Y2U9 406 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 A0A1B0GTQ1 180 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 OR6C6A6NF89 314 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 TSPAN2O60636 221 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 SNAPINO95295 136 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 IFNA1P01562 189 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 SDHBP21912 280 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 IL32P24001 234 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 CLDN15P56746 228 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
HDAC6-220ENST00000477528 RPL23AP62750 156 aaKnown RBP13.06□□□□□ -0.32
HDAC6-220ENST00000477528 LGI3Q8N145 548 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 DEFB123Q8N688 67 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 OR51F2Q8NH61 342 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 ADAM19Q9H013 955 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 KIF25Q9UIL4 384 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 SERPINE3A8MV23 424 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 TO15178 435 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 CPN1P15169 458 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 CAMK2BQ13554 666 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 TMEM200AQ86VY9 491 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 LILRB2Q8N423 598 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 ZDHHC22Q8N966 263 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 SCMH1Q96GD3 660 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 SLC25A32Q9H2D1 315 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 TMEM74BQ9NUR3 256 aa13.06□□□□□ -0.32
HDAC6-220ENST00000477528 ZNF806P0C7X5 589 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 B4GALT1P15291 398 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 RAB5BP61020 215 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 FZD5Q13467 585 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 CLLU1Q5K131 121 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 MUC20Q8N307 709 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-220ENST00000477528 PPP1R35Q8TAP8 253 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 FAM212BQ9NTI7 297 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-220ENST00000477528 PHF1O43189 567 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-220ENST00000477528 GPR137BO60478 399 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 STK11Q15831 433 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 OBP2BQ9NPH6 170 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 RFPL4AA6NLU0 287 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 RFPL4AL1F8VTS6 287 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 DXOO77932 396 aaKnown RBP13.05□□□□□ -0.32
HDAC6-220ENST00000477528 SULT1A3P0DMM9 295 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 SULT1A4P0DMN0 295 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 PEA15Q15121 130 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 OR52N4Q8NGI2 321 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 GLYATL2Q8WU03 294 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 CNTD2Q9H8S5 307 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 MZT1Q08AG7 82 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 TAF9Q16594 264 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 OR52W1Q6IF63 320 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 CDH26Q8IXH8 852 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 ROBO4Q8WZ75 1007 aa13.05□□□□□ -0.32
HDAC6-220ENST00000477528 KISS1RQ969F8 398 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-220ENST00000477528 SDHCQ99643 169 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-220ENST00000477528 C7orf66A4D0T2 115 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 TTLL8A6PVC2 850 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 PHLDA2Q53GA4 152 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 PPP1R1CQ8WVI7 109 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 ASB5Q8WWX0 329 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms