RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PRKXP51817 358 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 ZNF121P58317 390 aaPredicted RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 H3F3AP84243 136 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 EIF3IQ13347 325 aaKnown RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 CAMK2BQ13554 666 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 HES3Q5TGS1 186 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 PRAMEF20Q5VT98 475 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 AWAT2Q6E213 333 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 TMUB2Q71RG4 321 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 DOK3Q7L591 496 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 ABHD12BQ7Z5M8 362 aaPredicted RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 TRAPPC6BQ86SZ2 158 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 OR8B12Q8NGG6 310 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 OR10R2Q8NGX6 335 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 WDR89Q96FK6 387 aaPredicted RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 SLC6A7Q99884 636 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 DDA1Q9BW61 102 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 PNRC2Q9NPJ4 139 aaKnown RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 KCNN3Q9UGI6 736 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 FARSAQ9Y285 508 aaKnown RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 OR14I1A6ND48 311 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 ARPC5O15511 151 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 RP2O75695 350 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 PDGFAP04085 211 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 PPP3CBP16298 524 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 ENPP1P22413 925 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 DSCR4P56555 118 aaPredicted RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 FGL1Q08830 312 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 HLXQ14774 488 aaPredicted RBP14.53□□□□□ -0.08
TMEM53-208ENST00000476724 TOR2AQ5JU69 321 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 TMED4Q7Z7H5 227 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 COMMD7Q86VX2 200 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 ZDHHC22Q8N966 263 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 OR13C8Q8NGS7 320 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 ZPBPQ9BS86 351 aa14.53□□□□□ -0.08
TMEM53-208ENST00000476724 WIPF3A6NGB9 483 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 RFPL4AA6NLU0 287 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 RFPL4AL1F8VTS6 287 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 CX3CR1P49238 355 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 CLDN17P56750 224 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 UBE2MP61081 183 aaKnown RBP14.52□□□□□ -0.09
TMEM53-208ENST00000476724 CXADRP78310 365 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 SRSF4Q08170 494 aaKnown RBP14.52□□□□□ -0.09
TMEM53-208ENST00000476724 TRIP6Q15654 476 aaKnown RBP14.52□□□□□ -0.09
TMEM53-208ENST00000476724 SCGB2B2Q4G0G5 96 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 DCAF12L2Q5VW00 463 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 COMMD2Q86X83 199 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 KCNG3Q8TAE7 436 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 NAA11Q9BSU3 229 aaPredicted RBP14.52□□□□□ -0.09
TMEM53-208ENST00000476724 ZNF160Q9HCG1 818 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 GPR84Q9NQS5 396 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 TCFL5Q9UL49 500 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 FREM2Q5SZK8 3169 aa14.52□□□□□ -0.09
TMEM53-208ENST00000476724 KNTC1P50748 2209 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 FXYD6-FXYD2A0A087WZ82 144 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 CCDC187A0A096LP49 1063 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 RER1O15258 196 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 RAMP1O60894 148 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 B3GALNT1O75752 331 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 RPA2P15927 270 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 AGTR1P30556 359 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 SSR4P51571 173 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 ZNF133P52736 654 aaPredicted RBP14.51□□□□□ -0.09
TMEM53-208ENST00000476724 OC90Q02509 493 aaPredicted RBP14.51□□□□□ -0.09
TMEM53-208ENST00000476724 C10orf128Q5T292 105 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 FAHD2BQ6P2I3 314 aaPredicted RBP14.51□□□□□ -0.09
TMEM53-208ENST00000476724 ZNF101Q8IZC7 436 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 ZNF283Q8N7M2 679 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 PAQR8Q8TEZ7 354 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 NTNG2Q96CW9 530 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 FAHD2AQ96GK7 314 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 FXYD6Q9H0Q3 95 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 IFT46Q9NQC8 304 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 EP300Q09472 2414 aaPredicted RBP14.51□□□□□ -0.09
TMEM53-208ENST00000476724 CD8AP01732 235 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 GSTP1P09211 210 aaKnown RBP14.51□□□□□ -0.09
TMEM53-208ENST00000476724 UBBP0CG47 229 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 MSR1P21757 451 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 CALCRP30988 508 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 OTX2P32243 289 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 LIN54Q6MZP7 749 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 PPP1R32Q7Z5V6 425 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 PIP4P1Q86T03 277 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 SLC25A42Q86VD7 318 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 OR5AS1Q8N127 324 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 OR4S1Q8NGB4 309 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 TMEM54Q969K7 222 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 ARL6Q9H0F7 186 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 MRPS28Q9Y2Q9 187 aaKnown RBP14.51□□□□□ -0.09
TMEM53-208ENST00000476724 PCDHGA1Q9Y5H4 931 aa14.51□□□□□ -0.09
TMEM53-208ENST00000476724 CRYZL1O95825 349 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 LIFP15018 202 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 ABOP16442 354 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 HLA-GP17693 338 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 CD34P28906 385 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 CSNK1A1P48729 337 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 CSNK2A1P68400 391 aaPredicted RBP14.5□□□□□ -0.09
TMEM53-208ENST00000476724 DHRS2Q13268 280 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 GLIPR1L1Q6UWM5 242 aa14.5□□□□□ -0.09
TMEM53-208ENST00000476724 FOXL2NBQ6ZUU3 175 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms