RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 CD1AP06126 327 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 LCKP06239 509 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 GAAP10253 952 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 CPEP16870 476 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 MSR1P21757 451 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 GALP22466 123 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 IL32P24001 234 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 PSMA1P25786 263 aaKnown RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 DCTDP32321 178 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 RGS6P49758 472 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SELENOPP49908 381 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 GBX2P52951 348 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 GP2P55259 537 aaKnown RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SH3BGRP55822 239 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 PCBD1P61457 104 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 LMO4P61968 165 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 MRPS34P82930 218 aaKnown RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 RELBQ01201 579 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ROM1Q03395 351 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF85Q03923 595 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SLC9A3R2Q15599 337 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ARMCX4Q5H9R4 360 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 TIMM23BQ5SRD1 257 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 C1QTNF12Q5T7M4 302 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 FAM27BQ5VT28 67 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 CARD17Q5XLA6 110 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SLC22A25Q6T423 547 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 BHLHA15Q7RTS1 189 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 NUFIP2Q7Z417 695 aaKnown RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 FAM220AQ7Z4H9 259 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 DPPA2Q7Z7J5 298 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SYT9Q86SS6 491 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SATL1Q86VE3 508 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ANKRD13BQ86YJ7 626 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 TUSC5Q8IXB3 177 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF100Q8IYN0 542 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ALDH16A1Q8IZ83 802 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 BPIFB2Q8N4F0 458 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF485Q8NCK3 441 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 OR6N2Q8NGY6 317 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 OR2AJ1Q8NGZ0 328 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 CLDND2Q8NHS1 167 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ABHD3Q8WU67 409 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 RAB2BQ8WUD1 216 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ZNRF4Q8WWF5 429 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 GATAD2BQ8WXI9 593 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 COQ7Q99807 217 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF649Q9BS31 505 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 MROQ9BYG7 248 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 NIPAL2Q9H841 368 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SIAEQ9HAT2 523 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 LPAR2Q9HBW0 351 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 TRIM36Q9NQ86 728 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 POLE4Q9NR33 117 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 CLEC2DQ9UHP7 191 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 TRAV20A0A0B4J274 112 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 A0A1W2PPL8 197 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 TVP23AA6NH52 213 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF587BE7ETH6 402 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 H3BSA7 217 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 J3QLW9 94 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 APOL3O95236 402 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 FARS2O95363 451 aaKnown RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 APOC1P02654 83 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 MRPL3P09001 348 aaKnown RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 CST2P09228 141 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 SPARCP09486 303 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 HSMCR30P0CW71 290 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 HOXB1P14653 301 aaPredicted RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 CD36P16671 472 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF19P17023 458 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 PAX7P23759 505 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 PTAFRP25105 342 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 NAA10P41227 235 aaPredicted RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 OR3A2P47893 321 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 TGM4P49221 684 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 TGFBR3Q03167 851 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 FMODQ06828 376 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 ECH1Q13011 328 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 HLXQ14774 488 aaPredicted RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF684Q5T5D7 378 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 FBXW9Q5XUX1 488 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 OLFML2AQ68BL7 652 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 FDX2Q6P4F2 183 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 RPL22L1Q6P5R6 122 aaKnown RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 BRICD5Q6PL45 260 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 TMEM108Q6UXF1 575 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 VASH1Q7L8A9 365 aaPredicted RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF627Q7L945 461 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 DPY19L4Q7Z388 723 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 KRT77Q7Z794 578 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 P2RY8Q86VZ1 359 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 CLVS1Q8IUQ0 354 aaPredicted RBP5.5□□□□□ -1.53
CLDN4-205ENST00000476494 CCDC36Q8IYA8 594 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF679Q8IYX0 411 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 MS4A15Q8N5U1 240 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 TEX29Q8N6K0 151 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 GJC3Q8NFK1 279 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 OR52N5Q8NH56 324 aa5.5□□□□□ -1.53
CLDN4-205ENST00000476494 NANPQ8TBE9 248 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms