RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SPANXA2-OT1Q8N9U9 137 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 UBAC2Q8NBM4 344 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 CIRBP-AS1Q8TBR5 109 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 HAUS1Q96CS2 278 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 PRRC1Q96M27 445 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 RNF145Q96MT1 663 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 OPALINQ96PE5 141 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 CHCHD7Q9BUK0 85 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 FGF23Q9GZV9 251 aaPredicted RBP1.85□□□□□ -2.11
LTN1-204ENST00000475344 SLC38A10Q9HBR0 1119 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 DHCR7Q9UBM7 475 aaKnown RBP1.85□□□□□ -2.11
LTN1-204ENST00000475344 CBY1Q9Y3M2 126 aa1.85□□□□□ -2.11
LTN1-204ENST00000475344 LTBP4Q8N2S1 1624 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 A0A1W2PRD5 423 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 RAD1O60671 282 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 CSNK2A2P19784 350 aaPredicted RBP1.84□□□□□ -2.11
LTN1-204ENST00000475344 USF1P22415 310 aaPredicted RBP1.84□□□□□ -2.11
LTN1-204ENST00000475344 FABP6P51161 128 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 CLDN18P56856 261 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 PRKCDQ05655 676 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 DGCR6Q14129 220 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 YIF1BQ5BJH7 314 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 FAM222AQ5U5X8 452 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 WDR82Q6UXN9 313 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 COMMD1Q8N668 190 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 C8orf31Q8N9H6 132 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 ST20-AS1Q8NBB2 130 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 APCDD1LQ8NCL9 501 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 C19orf18Q8NEA5 215 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 CCDC148Q8NFR7 591 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 TTLQ8NG68 377 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 TEAD3Q99594 435 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 RBBP8Q99708 897 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 GGTLC1Q9BX51 225 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 ELOVL6Q9H5J4 265 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 CCNB1IP1Q9NPC3 277 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 SLC17A7Q9P2U7 560 aa1.84□□□□□ -2.11
LTN1-204ENST00000475344 RCL1Q9Y2P8 373 aaKnown RBP1.84□□□□□ -2.11
LTN1-204ENST00000475344 TSPOAP1O95153 1857 aa1.84□□□□□ -2.12
LTN1-204ENST00000475344 ZNF878C9JN71 531 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 H7C1H1 209 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 PLPP1O14494 284 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 SLC9A3R1O14745 358 aaPredicted RBP1.83□□□□□ -2.12
LTN1-204ENST00000475344 POLR1CO15160 346 aaPredicted RBP1.83□□□□□ -2.12
LTN1-204ENST00000475344 PLIN3O60664 434 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 CTAG2O75638 210 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 TACSTD2P09758 323 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 GFAPP14136 432 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 RAB5AP20339 215 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 GSTM3P21266 225 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 PSMB5P28074 263 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 RAD51Q06609 339 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 SIGLEC14Q08ET2 396 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 ITIH4Q14624 930 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 TEX30Q5JUR7 227 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 RWDD4Q6NW29 188 aaKnown RBP1.83□□□□□ -2.12
LTN1-204ENST00000475344 GUSBP11Q6P575 273 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 SPINT4Q6UDR6 99 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 RTL4Q6ZR62 310 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 BPIFCQ8NFQ6 507 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 OR4M1Q8NGD0 313 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 OR52K2Q8NGK3 314 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 RPEQ96AT9 228 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 C9orf72Q96LT7 481 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 FRMD8P1Q9BZ68 369 aaPredicted RBP1.83□□□□□ -2.12
LTN1-204ENST00000475344 SLC7A5P2Q9GIP4 190 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 SLIRPQ9GZT3 109 aaKnown RBP1.83□□□□□ -2.12
LTN1-204ENST00000475344 PIGUQ9H490 435 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 CLSTN2Q9H4D0 955 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 ACP6Q9NPH0 428 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 AGPAT4Q9NRZ5 378 aa1.83□□□□□ -2.12
LTN1-204ENST00000475344 LRRIQ4A6NIV6 560 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 OR5H1A6NKK0 313 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 GABRR3A8MPY1 467 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 NME4O00746 187 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 ERI3O43414 337 aaKnown RBP1.82□□□□□ -2.12
LTN1-204ENST00000475344 XRCC2O43543 280 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 FCN3O75636 299 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 CYB5R3P00387 301 aaPredicted RBP1.82□□□□□ -2.12
LTN1-204ENST00000475344 IGLV3-25P01717 112 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 HLA-DQB1P01920 261 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 TPM2P07951 284 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 PGA5P0DJD9 388 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 CD37P11049 281 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 RFC3P40938 356 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 MAGEA1P43355 309 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 PPICP45877 212 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 PRLHRP49683 370 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 GDI2P50395 445 aaKnown RBP1.82□□□□□ -2.12
LTN1-204ENST00000475344 ZNF266Q14584 549 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 TRMT5Q32P41 509 aaKnown RBP1.82□□□□□ -2.12
LTN1-204ENST00000475344 CD300LGQ6UXG3 332 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 C12orf54Q6X4T0 127 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 TMPRSS11AQ6ZMR5 421 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 ERO1BQ86YB8 467 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 VKORC1L1Q8N0U8 176 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 OR10W1Q8NGF6 305 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 OR56A4Q8NGH8 313 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 OR1J4Q8NGS1 313 aa1.82□□□□□ -2.12
LTN1-204ENST00000475344 ZNF317Q96PQ6 595 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms