RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 PMP2P02689 132 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 ITGA5P08648 1049 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 ZBTB25P24278 435 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 LRRC69Q6ZNQ3 347 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 SLC16A9Q7RTY1 509 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 TMPRSS12Q86WS5 348 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 C9orf40Q8IXQ3 194 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 SLC35F3Q8IY50 421 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 ZSCAN4Q8NAM6 433 aaPredicted RBP11.6□□□□□ -0.55
CCNL1-216ENST00000475298 OR13C8Q8NGS7 320 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 OR6N2Q8NGY6 317 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 OR10AC1Q8NH08 325 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 SLC46A1Q96NT5 459 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 SYT4Q9H2B2 425 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 SMOC1Q9H4F8 434 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 FRRS1LQ9P0K9 344 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 IKZF2Q9UKS7 526 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 CSAG2Q9Y5P2 127 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 KPTNQ9Y664 436 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 FER1L5A0AVI2 2057 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 NUP210LQ5VU65 1888 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 A0A1W2PPC1 479 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 METTL12A8MUP2 240 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 ALOX12BO75342 701 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 MAS1LP35410 378 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 DVL1P1P54792 670 aaPredicted RBP11.59□□□□□ -0.55
CCNL1-216ENST00000475298 CFHR1Q03591 330 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 CLEC9AQ6UXN8 241 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 SHISA6Q6ZSJ9 500 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 DPY19L4Q7Z388 723 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 DPPA2Q7Z7J5 298 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 KDF1Q8NAX2 398 aaPredicted RBP11.59□□□□□ -0.55
CCNL1-216ENST00000475298 UBAC2Q8NBM4 344 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 OR56B1Q8NGI3 324 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 OR10D4PQ8NGN7 298 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 OR1L3Q8NH93 324 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 GPX8Q8TED1 209 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 FOXRED1Q96CU9 486 aaPredicted RBP11.59□□□□□ -0.55
CCNL1-216ENST00000475298 YPEL4Q96NS1 127 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 OR5B2Q96R09 309 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 AMELYQ99218 206 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 C20orf24Q9BUV8 137 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 ULBP3Q9BZM4 244 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 ZDHHC8Q9ULC8 765 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 IGKV3D-11A0A0A0MRZ8 115 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 FRG2CA6NGY1 282 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 RAB3DO95716 219 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 ABHD16AO95870 558 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 CRHP06850 196 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 SLC2A1P11166 492 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 PRSS3P35030 304 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 ID4P47928 161 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 SLC6A9P48067 706 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 SLC25A1P53007 311 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 HSD11B2P80365 405 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 KIAA0141Q14154 515 aaPredicted RBP11.59□□□□□ -0.55
CCNL1-216ENST00000475298 C14orf28Q4W4Y0 310 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 C17orf82Q86X59 251 aaPredicted RBP11.59□□□□□ -0.55
CCNL1-216ENST00000475298 PNLDC1Q8NA58 520 aaKnown RBP11.59□□□□□ -0.55
CCNL1-216ENST00000475298 OR51A4Q8NGJ6 313 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 DCUN1D4Q92564 292 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 SLC25A36Q96CQ1 311 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 KCNK15Q9H427 330 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 SLC2A4RGQ9NR83 387 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 WASF3Q9UPY6 502 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 VSIG4Q9Y279 399 aa11.59□□□□□ -0.55
CCNL1-216ENST00000475298 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 MSGN1A6NI15 193 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 H0YIZ8 118 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 H7C1Q1 480 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 ZNF217O75362 1048 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 IFNA17P01571 189 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 FOLR1P15328 257 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 PSMB6P28072 239 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 IL12BP29460 328 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 GALNSP34059 522 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 CEACAM6P40199 344 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 SULT1A1P50225 295 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 NUTF2P61970 127 aaKnown RBP11.58□□□□□ -0.56
CCNL1-216ENST00000475298 EBPQ15125 230 aaKnown RBP11.58□□□□□ -0.56
CCNL1-216ENST00000475298 RSU1Q15404 277 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 NSDHLQ15738 373 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 TMPPEQ6ZT21 453 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.58□□□□□ -0.56
CCNL1-216ENST00000475298 FAM220AQ7Z4H9 259 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 CDC20BQ86Y33 519 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 OR5AK2Q8NH90 309 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 ADAM19Q9H013 955 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 DOK5Q9P104 306 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 LAMP5Q9UJQ1 280 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 WIF1Q9Y5W5 379 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 VPS13AQ96RL7 3174 aa11.58□□□□□ -0.56
CCNL1-216ENST00000475298 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
CCNL1-216ENST00000475298 EEF1E1-BLOC1S5C9J1V9 151 aa11.57□□□□□ -0.56
CCNL1-216ENST00000475298 LMO7DNF2Z398 122 aa11.57□□□□□ -0.56
CCNL1-216ENST00000475298 AMY2AP04746 511 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms