RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RPUSD4Q96CM3 377 aaKnown RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 FAHP16930 419 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 KIRREL2Q6UWL6 708 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 MOB3BQ86TA1 216 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 FBXW5Q969U6 566 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 ERGIC1Q969X5 290 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 ADGRG3Q86Y34 549 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 OR11G2Q8NGC1 345 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 OR10P1Q8NGE3 313 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 OR1J1Q8NGS3 322 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 ST8SIA1Q92185 356 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 TMEM230Q96A57 120 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 LRRC61Q9BV99 259 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 MOB1AQ9H8S9 216 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 MN1Q10571 1320 aaPredicted RBP9.91□□□□□ -0.82
VAPB-204ENST00000475243 PPM1DO15297 605 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 RAF1P04049 648 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 FABP1P07148 127 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 MRPL58Q14197 206 aaKnown RBP9.91□□□□□ -0.82
VAPB-204ENST00000475243 OR52B4Q8NGK2 314 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 SMIM19Q96E16 107 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 SIGLEC11Q96RL6 698 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 COMMD5Q9GZQ3 224 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 TDRD15B5MCY1 1934 aaKnown RBP9.91□□□□□ -0.82
VAPB-204ENST00000475243 OR2J3O76001 311 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 FOXF1Q12946 379 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 OR5I1Q13606 314 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 PLA1AQ53H76 456 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 GUSBP11Q6P575 273 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 HIST2H3AQ71DI3 136 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 TMED6Q8WW62 240 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 CD3DP04234 171 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 IP6K3Q96PC2 410 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 OR2F2O95006 317 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 EPHA2P29317 976 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 SLC17A1Q14916 467 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 WIPI1Q5MNZ9 446 aaPredicted RBP9.91□□□□□ -0.82
VAPB-204ENST00000475243 ST8SIA4Q92187 359 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 FBXO8Q9NRD0 319 aa9.91□□□□□ -0.82
VAPB-204ENST00000475243 A0A1B0GTL3 188 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 OR6C68A6NDL8 312 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 H3BP45 60 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 TOX4O94842 621 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 SMIM18P0DKX4 95 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 TCTN1Q2MV58 587 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 C4orf17Q53FE4 359 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 STAC2Q6ZMT1 411 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 DERL3Q96Q80 235 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 LYSMD1Q96S90 227 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 NDUFB11Q9NX14 153 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 DOCK1Q14185 1865 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 CD80P33681 288 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 RGS7BPQ6MZT1 257 aaPredicted RBP9.9□□□□□ -0.82
VAPB-204ENST00000475243 RPUSD3Q6P087 351 aaKnown RBP9.9□□□□□ -0.82
VAPB-204ENST00000475243 FAM122CQ6P4D5 195 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 SPNS1Q9H2V7 528 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 PSENENQ9NZ42 101 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 ZNF835Q9Y2P0 537 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 KCNE3Q9Y6H6 103 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 ABCD3P28288 659 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 CEACAM16Q2WEN9 425 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 SCARB1Q8WTV0 552 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 MRGPRX4Q96LA9 322 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 LIN7CQ9NUP9 197 aaKnown RBP9.9□□□□□ -0.82
VAPB-204ENST00000475243 FRG2CA6NGY1 282 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 PPP5D1E7EU14 171 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 IGLV3-25P01717 112 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 GNG10P50151 68 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 NOVA1P51513 510 aaKnown RBP9.9□□□□□ -0.82
VAPB-204ENST00000475243 PRDX4Q13162 271 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 FAM53BQ14153 422 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 FZD2Q14332 565 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 BTNL8Q6UX41 500 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 DRAM2Q6UX65 266 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 C1orf87Q8N0U7 546 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 OR2A1Q8NGT9 310 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 GALMQ96C23 342 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 CMBLQ96DG6 245 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 CNRIP1Q96F85 164 aaPredicted RBP9.9□□□□□ -0.82
VAPB-204ENST00000475243 RPP25Q9BUL9 199 aaKnown RBP9.9□□□□□ -0.82
VAPB-204ENST00000475243 AUNIPQ9H7T9 357 aa9.9□□□□□ -0.82
VAPB-204ENST00000475243 UMAD1C9J7I0 102 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 CBR3O75828 277 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 FUCA1P04066 466 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 ADRA2CP18825 462 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 DHRS13Q6UX07 377 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 ANGPTL7O43827 346 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 JUNBP17275 347 aaPredicted RBP9.9□□□□□ -0.83
VAPB-204ENST00000475243 GABRG2P18507 467 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 ZNF83P51522 516 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 ACVR1Q04771 509 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 C17orf107Q6ZR85 190 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 TSEN54Q7Z6J9 526 aaKnown RBP9.9□□□□□ -0.83
VAPB-204ENST00000475243 CADM3Q8N126 398 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 KTI12Q96EK9 354 aaPredicted RBP9.9□□□□□ -0.83
VAPB-204ENST00000475243 DLL4Q9NR61 685 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 ZNF391Q9UJN7 358 aa9.9□□□□□ -0.83
VAPB-204ENST00000475243 ARL2-SNX15V9GYD0 113 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms