RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 CCDC22O60826 627 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 GADD45GO95257 159 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 IGHV4-59P01825 116 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 RPS27P42677 84 aaKnown RBP20.59■□□□□ 0.89
TMEM54-205ENST00000475208 SMIM11AP58511 58 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 PSME3P61289 254 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 ARF6P62330 175 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 GLYATL3Q5SZD4 288 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 ZNF826PQ6ZT77 177 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 SCCPDHQ8NBX0 429 aa20.59■□□□□ 0.89
TMEM54-205ENST00000475208 NSRP1Q9H0G5 558 aaKnown RBP20.59■□□□□ 0.89
TMEM54-205ENST00000475208 MRPL15Q9P015 296 aaKnown RBP20.59■□□□□ 0.89
TMEM54-205ENST00000475208 A0A0U1RQK1 487 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 C5orf63A6NC05 138 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 IDH3BO43837 385 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 OR10H3O60404 316 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 FCN3O75636 299 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 GRPP07492 148 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 ZNF823P16415 610 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 PYCR1P32322 319 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.58■□□□□ 0.89
TMEM54-205ENST00000475208 SLC35F1Q5T1Q4 408 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 BTN2A1Q7KYR7 527 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 FAM90A1Q86YD7 464 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 GCSAMQ8N6F7 178 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 LINC01006Q8NI28 216 aa20.58■□□□□ 0.89
TMEM54-205ENST00000475208 RBM4BQ9BQ04 359 aaKnown RBP20.58■□□□□ 0.89
TMEM54-205ENST00000475208 hCG_1807616A0A1W2PRN6 198 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 DVL1O14640 695 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 ASPHD2Q6ICH7 369 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 DRAM2Q6UX65 266 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 LDLRAD3Q86YD5 345 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 PDZD9Q8IXQ8 264 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 LNX2Q8N448 690 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 SPERTQ8NA61 448 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 OR56B2PQ8NGI1 322 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 UBE2FQ969M7 185 aa20.57■□□□□ 0.88
TMEM54-205ENST00000475208 TVP23AA6NH52 213 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 GMNNO75496 209 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 OTX1P32242 354 aaPredicted RBP20.56■□□□□ 0.88
TMEM54-205ENST00000475208 GSSP48637 474 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 POU4F2Q12837 409 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 PROKR2Q8NFJ6 384 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 ST8SIA4Q92187 359 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 CCDC134Q9H6E4 229 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 SPAG4Q9NPE6 437 aa20.56■□□□□ 0.88
TMEM54-205ENST00000475208 IGHV3OR15-7A0A075B7D8 119 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.55■□□□□ 0.88
TMEM54-205ENST00000475208 CLPXO76031 633 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 ECDO95905 644 aaPredicted RBP20.55■□□□□ 0.88
TMEM54-205ENST00000475208 SEMG1P04279 462 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 PSKH1P11801 424 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 IFNGR2P38484 337 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 IER3P46695 156 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 PROK1P58294 105 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 MZT1Q08AG7 82 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 RNF148Q8N7C7 305 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 PYURFQ96I23 114 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 PKP2Q99959 881 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 COPS4Q9BT78 406 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 ADA2Q9NZK5 511 aa20.55■□□□□ 0.88
TMEM54-205ENST00000475208 BHLHE40O14503 412 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 SLC2A1P11166 492 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 PRKXP51817 358 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 TAF9Q16594 264 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 C11orf91Q3C1V1 193 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 TEX36Q5VZQ5 186 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 LYPD4Q6UWN0 246 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 VMO1Q7Z5L0 202 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 PIP4P2Q8N4L2 257 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 CYB561A3Q8NBI2 242 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 OR4C15Q8NGM1 316 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 GORASP2Q9H8Y8 452 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 C14orf119Q9NWQ9 140 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 KAAG1Q9UBP8 84 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 RPUSD1Q9UJJ7 312 aaKnown RBP20.54■□□□□ 0.88
TMEM54-205ENST00000475208 N6AMT1Q9Y5N5 214 aa20.54■□□□□ 0.88
TMEM54-205ENST00000475208 LHBP01229 141 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 TSPAN31Q12999 210 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 CDONQ4KMG0 1287 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 DCXRQ7Z4W1 244 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 ZDHHC21Q8IVQ6 265 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 FGFRL1Q8N441 504 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 OR2T4Q8NH00 348 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 GNPDA2Q8TDQ7 276 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 ZNRF4Q8WWF5 429 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 DPAGT1Q9H3H5 408 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 OPA3Q9H6K4 179 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 EGLN3Q9H6Z9 239 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 CNTD2Q9H8S5 307 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 TCF7L1Q9HCS4 588 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 KPTNQ9Y664 436 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 COMMD3-BMI1R4GMX3 469 aa20.53■□□□□ 0.88
TMEM54-205ENST00000475208 A0A1B0GW55 424 aa20.52■□□□□ 0.88
TMEM54-205ENST00000475208 DUX4L2P0CJ85 424 aa20.52■□□□□ 0.88
TMEM54-205ENST00000475208 DUX4L3P0CJ86 424 aa20.52■□□□□ 0.88
TMEM54-205ENST00000475208 DUX4L4P0CJ87 422 aa20.52■□□□□ 0.88
TMEM54-205ENST00000475208 DUX4L5P0CJ88 424 aa20.52■□□□□ 0.88
TMEM54-205ENST00000475208 DUX4L6P0CJ89 424 aa20.52■□□□□ 0.88
TMEM54-205ENST00000475208 DUX4L7P0CJ90 424 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms