RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 SDHCQ99643 169 aaPredicted RBP16.97■□□□□ 0.31
ATPAF2-206ENST00000474627 FOXB1Q99853 325 aa16.97■□□□□ 0.31
ATPAF2-206ENST00000474627 UBTD1Q9HAC8 227 aa16.97■□□□□ 0.31
ATPAF2-206ENST00000474627 ABCB10Q9NRK6 738 aa16.97■□□□□ 0.31
ATPAF2-206ENST00000474627 COMMD3Q9UBI1 195 aa16.97■□□□□ 0.31
ATPAF2-206ENST00000474627 LRBAP50851 2863 aa16.97■□□□□ 0.31
ATPAF2-206ENST00000474627 SPG11Q96JI7 2443 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 TEX15Q9BXT5 2789 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 PDZD2O15018 2839 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 IGKV1D-43A0A0B4J1Z2 117 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 DHHO43323 396 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 NCR1O76036 304 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 HOXB1P14653 301 aaPredicted RBP16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 B4GALT1P15291 398 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 SRMP19623 302 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 STEAP3Q658P3 488 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 GPR148Q8TDV2 347 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 ST7LQ8TDW4 575 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 CMTM3Q96MX0 182 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 MRI1Q9BV20 369 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 PLEKHA6Q9Y2H5 1048 aa16.96■□□□□ 0.31
ATPAF2-206ENST00000474627 ABCD4O14678 606 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 PTTG1O95997 202 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 PTAFRP25105 342 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 CD40P25942 277 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 THBS2P35442 1172 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 RPS27P42677 84 aaKnown RBP16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 ZNF79Q15937 498 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 CEP78Q5JTW2 689 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 IDNKQ5T6J7 187 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 ADAM5Q6NVV9 412 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 FAM131AQ6UXB0 335 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 LRRN1Q6UXK5 716 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 LRRC28Q86X40 367 aaPredicted RBP16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 ZNF676Q8N7Q3 588 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 RNF133Q8WVZ7 376 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 C11orf40Q8WZ69 217 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 SLITRK2Q9H156 845 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 NOX4Q9NPH5 578 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 CYB5R1Q9UHQ9 305 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 EDARQ9UNE0 448 aa16.95■□□□□ 0.3
ATPAF2-206ENST00000474627 SMIM30A4D0T7 59 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 PIN1P1O15428 100 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 PSMD7P51665 324 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 C10orf128Q5T292 105 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 ZNF627Q7L945 461 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 PRSS35Q8N3Z0 413 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 AKAP1Q92667 903 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 R4GMQ9 66 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 AKAP6Q13023 2319 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 CSMD2Q7Z408 3487 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 TRBV5-7A0A0A0MS05 114 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 ZNF503-AS2A6NEH8 195 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 SRSF10O75494 262 aaKnown RBP16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 MPZL1O95297 269 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 WDR38Q5JTN6 314 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 DCXRQ7Z4W1 244 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 CATSPERDQ86XM0 798 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 SNX29P2Q8IUI4 249 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 CCDC36Q8IYA8 594 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 LILRB1Q8NHL6 650 aaPredicted RBP16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 NEUROG1Q92886 237 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 PPP1R14BQ96C90 147 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 FOXN4Q96NZ1 517 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 C1orf198Q9H425 327 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 PPP1R3EQ9H7J1 279 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 NIPAL2Q9H841 368 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 TMEM38BQ9NVV0 291 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 ITGB1BP2Q9UKP3 347 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 LRP12Q9Y561 859 aa16.94■□□□□ 0.3
ATPAF2-206ENST00000474627 HPGDSO60760 199 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 HLA-HP01893 362 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 DNASE1P24855 282 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 KIR3DL2P43630 455 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 MMP16P51512 607 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 ZNF84P51523 738 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 LSM6P62312 80 aaKnown RBP16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 SPOCK1Q08629 439 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 CNIH2Q6PI25 160 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 FOXL2NBQ6ZUU3 175 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 SLC22A24Q8N4F4 322 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 HTRA1Q92743 480 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 CYSLTR2Q9NS75 346 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 RABL2AQ9UBK7 228 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 RABL2BQ9UNT1 228 aa16.93■□□□□ 0.3
ATPAF2-206ENST00000474627 IGHV1-18A0A0C4DH31 117 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 SHISA9B4DS77 424 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 HS3ST1O14792 307 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 ISG15P05161 165 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 CD79AP11912 226 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 CBR1P16152 277 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 NPR2P20594 1047 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 OR10A3P58181 314 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 SLC22A25Q6T423 547 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 MDP1Q86V88 176 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 IL17RDQ8NFM7 739 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 NINJ1Q92982 152 aa16.92■□□□□ 0.3
ATPAF2-206ENST00000474627 TCF7L1Q9HCS4 588 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms