RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 DCAF16Q9NXF7 216 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 TMEM178BH3BS89 294 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 MLNRO43193 412 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 TCF21O43680 179 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 IGHV2-70P01814 119 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 GRPP07492 148 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 MRPL3P09001 348 aaKnown RBP9.72□□□□□ -0.85
CPNE1-222ENST00000473373 PSKH1P11801 424 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 CFL1P23528 166 aaKnown RBP9.72□□□□□ -0.85
CPNE1-222ENST00000473373 ZNF121P58317 390 aaPredicted RBP9.72□□□□□ -0.85
CPNE1-222ENST00000473373 ESRRGP62508 458 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 CDK5Q00535 292 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 HNRNPA0Q13151 305 aaKnown RBP9.72□□□□□ -0.85
CPNE1-222ENST00000473373 ATP6AP1Q15904 470 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 RSPO1Q2MKA7 263 aaPredicted RBP9.72□□□□□ -0.85
CPNE1-222ENST00000473373 SLC35D3Q5M8T2 416 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 PRAMEF6Q5VXH4 476 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 NLRC3Q7RTR2 1065 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 FTMTQ8N4E7 242 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 ZNF454Q8N9F8 522 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 OR56B2PQ8NGI1 322 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 DVL3Q92997 716 aaPredicted RBP9.72□□□□□ -0.85
CPNE1-222ENST00000473373 C1orf159Q96HA4 380 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 REEP6Q96HR9 211 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 SEMA6AQ9H2E6 1030 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 C7orf69Q9H7B7 122 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 SLC25A19Q9HC21 320 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 C14orf119Q9NWQ9 140 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 OR5V1Q9UGF6 321 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 IKZF2Q9UKS7 526 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 GTF2A1LQ9UNN4 478 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 ORC6Q9Y5N6 252 aa9.72□□□□□ -0.85
CPNE1-222ENST00000473373 PPIAL4EA0A075B759 164 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 PPIAL4DF5H284 164 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 GMDSO60547 372 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 RGS9O75916 674 aaPredicted RBP9.71□□□□□ -0.86
CPNE1-222ENST00000473373 PPIAL4FP0DN26 164 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 RBMXP38159 391 aaKnown RBP9.71□□□□□ -0.86
CPNE1-222ENST00000473373 DAPP51397 102 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 GNB2P62879 340 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 PTGES3Q15185 160 aaKnown RBP9.71□□□□□ -0.86
CPNE1-222ENST00000473373 ZMYND11Q15326 602 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 OR8B8Q15620 311 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 SNCBQ16143 134 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 KRTAP27-1Q3LI81 207 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 TMEM155Q4W5P6 130 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 LINC01590Q5TEZ4 76 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 KCTD18Q6PI47 426 aaPredicted RBP9.71□□□□□ -0.86
CPNE1-222ENST00000473373 SPERTQ8NA61 448 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 DEFB108BQ8NET1 73 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 BBS1Q8NFJ9 593 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 OR8B3Q8NGG8 313 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 OR52H1Q8NGJ2 320 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 OTOSQ8NHW6 89 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 FAM81AQ8TBF8 368 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 LRTOMTQ8WZ04 291 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 OR8B2Q96RD0 313 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 MRI1Q9BV20 369 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 PAPOLGQ9BWT3 736 aaKnown RBP9.71□□□□□ -0.86
CPNE1-222ENST00000473373 TTTY10Q9BZA0 68 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 MARCH7Q9H992 704 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 PATZ1Q9HBE1 687 aaKnown RBP9.71□□□□□ -0.86
CPNE1-222ENST00000473373 MIOXQ9UGB7 285 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 PPIAL4AQ9Y536 164 aa9.71□□□□□ -0.86
CPNE1-222ENST00000473373 LOC105371242A0A075B767 164 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 SAC3D1A6NKF1 404 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 ANXA2P2A6NMY6 339 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 J3QLI3 93 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 PSMD9O00233 223 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 FAM20BO75063 409 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 GATA3P23771 443 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 OTX1P32242 354 aaPredicted RBP9.7□□□□□ -0.86
CPNE1-222ENST00000473373 DDOSTP39656 456 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 KCNJ8Q15842 424 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 PCK2Q16822 640 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 ARMCX4Q5H9R4 360 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 BTNL3Q6UXE8 466 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 LRRN1Q6UXK5 716 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 KCTD8Q6ZWB6 473 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 SLC16A9Q7RTY1 509 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 LRRC28Q86X40 367 aaPredicted RBP9.7□□□□□ -0.86
CPNE1-222ENST00000473373 TIGD4Q8IY51 512 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 BPIFB2Q8N4F0 458 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 CELF2-AS1Q8N7Q2 184 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 TCEANCQ8N8B7 351 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 NANPQ8TBE9 248 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
CPNE1-222ENST00000473373 RNF133Q8WVZ7 376 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 ERGIC1Q969X5 290 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
CPNE1-222ENST00000473373 MROQ9BYG7 248 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 RIBC2Q9H4K1 309 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 NTN4Q9HB63 628 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 MRPL15Q9P015 296 aaKnown RBP9.7□□□□□ -0.86
CPNE1-222ENST00000473373 RNF7Q9UBF6 113 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 TMEM14AQ9Y6G1 99 aa9.7□□□□□ -0.86
CPNE1-222ENST00000473373 CEACAM18A8MTB9 384 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 EBAG9O00559 213 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 MITFO75030 526 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms