RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 RARRES3Q9UL19 164 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 SPATA2Q9UM82 520 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 UGT2A1Q9Y4X1 527 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 F11RQ9Y624 299 aaKnown RBP2.04□□□□□ -2.08
XRN1-210ENST00000472697 MAST4O15021 2626 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 IGHV1OR21-1A0A087WYE8 117 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 A8MX80 341 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 CDC7O00311 574 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 GPR171O14626 319 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 FGF17O60258 216 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 RAMP1O60894 148 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 AIFM1O95831 613 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 ARG1P05089 322 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 COX5BP10606 129 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 CYBAP13498 195 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 HOXB8P17481 243 aaPredicted RBP2.04□□□□□ -2.08
XRN1-210ENST00000472697 GLP1RP43220 463 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 MAGEA2P43356 314 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 XKP51811 444 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 NANOS3P60323 173 aaKnown RBP2.04□□□□□ -2.08
XRN1-210ENST00000472697 SLC35B1P78383 322 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 IL9RQ01113 521 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 TLE4Q04727 773 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 KDSRQ06136 332 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 GPNMBQ14956 572 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 PSG3Q16557 428 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 KRTAP21-3Q3LHN1 58 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 KRTAP24-1Q3LI83 254 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 PARP15Q460N3 678 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 C5orf47Q569G3 176 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 KLF17Q5JT82 389 aaPredicted RBP2.04□□□□□ -2.08
XRN1-210ENST00000472697 OR2W3Q7Z3T1 314 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 UBALD2Q8IYN6 164 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 TMEM156Q8N614 296 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 METTL27Q8N6F8 245 aaPredicted RBP2.04□□□□□ -2.08
XRN1-210ENST00000472697 BLOC1S5Q8TDH9 187 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 JSRP1Q96MG2 331 aaPredicted RBP2.04□□□□□ -2.08
XRN1-210ENST00000472697 NUDT9Q9BW91 350 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 SRRQ9GZT4 340 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 C20orf85Q9H1P6 137 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 RBFOX1Q9NWB1 397 aaKnown RBP2.04□□□□□ -2.08
XRN1-210ENST00000472697 FBXL3Q9UKT7 428 aa2.04□□□□□ -2.08
XRN1-210ENST00000472697 RFX7Q2KHR2 1363 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
XRN1-210ENST00000472697 C12orf77C9JDV5 145 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 NDUFAB1O14561 156 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 DHRS3O75911 302 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 LDOC1O95751 146 aaPredicted RBP2.03□□□□□ -2.08
XRN1-210ENST00000472697 ASS1P00966 412 aaKnown RBP2.03□□□□□ -2.08
XRN1-210ENST00000472697 IGKV1D-16P01601 117 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 LMO2P25791 158 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 CD70P32970 193 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 THBS3P49746 956 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 EMP2P54851 167 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 STX17P56962 302 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 RIPPLY3P57055 190 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 PRKCDQ05655 676 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 TRAF2Q12933 501 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 ZNF630Q2M218 657 aaPredicted RBP2.03□□□□□ -2.08
XRN1-210ENST00000472697 ZFP69Q49AA0 526 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 OR10J3Q5JRS4 329 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 PAGE3Q5JUK9 113 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 LRRC6Q86X45 466 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 TMEM190Q8WZ59 177 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 FGGYQ96C11 551 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 FLYWCH2Q96CP2 140 aaKnown RBP2.03□□□□□ -2.08
XRN1-210ENST00000472697 ANGPTL4Q9BY76 406 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 WDR54Q9H977 334 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 EDA2RQ9HAV5 297 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 MCUBQ9NWR8 336 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 SAMD4AQ9UPU9 718 aaKnown RBP2.03□□□□□ -2.08
XRN1-210ENST00000472697 PLLPQ9Y342 182 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 SNX24Q9Y343 169 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 TSC2P49815 1807 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 A0A0C4DFX4 3053 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 ABCB11O95342 1321 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 PTPRSQ13332 1948 aa2.03□□□□□ -2.08
XRN1-210ENST00000472697 IGHV4-30-2A0A087WSY4 118 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 CENPXA8MT69 81 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 H7C417 338 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 DFFAO00273 331 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 ACOT8O14734 319 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 TRANK1O15050 2925 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 CHMP2AO43633 222 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 PI15O43692 258 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 GCGP01275 180 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 IGKV5-2P06315 115 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 PRSS1P07477 247 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 GNAO1P09471 354 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 PSKH1P11801 424 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 ANOS1P23352 680 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 KIR3DL2P43630 455 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 EMDP50402 254 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 HCCSP53701 268 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 RHOAP61586 193 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 SELENOTP62341 195 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 GUSBP1Q15486 140 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 MICAQ29983 383 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 QRICH1Q2TAL8 776 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 ZBED5Q49AG3 693 aa2.03□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms