RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 WDR38Q5JTN6 314 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 SLC36A1Q7Z2H8 476 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 MRPL21Q7Z2W9 205 aaKnown RBP15.46■□□□□ 0.07
SORT1-203ENST00000471996 FAM216BQ8N7L0 139 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 WIPF2Q8TF74 440 aaPredicted RBP15.46■□□□□ 0.07
SORT1-203ENST00000471996 B9D2Q9BPU9 175 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 CCDC28BQ9BUN5 200 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 PARD6BQ9BYG5 372 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 MEGF9Q9H1U4 602 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 VSX1Q9NZR4 365 aaPredicted RBP15.46■□□□□ 0.07
SORT1-203ENST00000471996 NDUFAF1Q9Y375 327 aa15.46■□□□□ 0.07
SORT1-203ENST00000471996 NDUFB3O43676 98 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 CHST1O43916 411 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 MSX2P35548 267 aaPredicted RBP15.45■□□□□ 0.06
SORT1-203ENST00000471996 KRTAP10-11P60412 298 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 AANATQ16613 207 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 MEP1BQ16820 701 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 PCK2Q16822 640 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 PGM2L1Q6PCE3 622 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 LIAT1Q6ZQX7 453 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.45■□□□□ 0.06
SORT1-203ENST00000471996 CROCCP2Q86T23 111 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 AJUBAQ96IF1 538 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 PRRC1Q96M27 445 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 NUAK2Q9H093 628 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 METTL8Q9H825 291 aaKnown RBP15.45■□□□□ 0.06
SORT1-203ENST00000471996 ZNF702PQ9H963 129 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 MRPL15Q9P015 296 aaKnown RBP15.45■□□□□ 0.06
SORT1-203ENST00000471996 RAB21Q9UL25 225 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 SACSQ9NZJ4 4579 aa15.45■□□□□ 0.06
SORT1-203ENST00000471996 M0R1W7 72 aa15.44■□□□□ 0.06
SORT1-203ENST00000471996 CDC42EP2O14613 210 aa15.44■□□□□ 0.06
SORT1-203ENST00000471996 IFNA8P32881 189 aa15.44■□□□□ 0.06
SORT1-203ENST00000471996 ECH1Q13011 328 aa15.44■□□□□ 0.06
SORT1-203ENST00000471996 IKZF1Q13422 519 aa15.44■□□□□ 0.06
SORT1-203ENST00000471996 HABP2Q14520 560 aaPredicted RBP15.44■□□□□ 0.06
SORT1-203ENST00000471996 ZBED5Q49AG3 693 aa15.44■□□□□ 0.06
SORT1-203ENST00000471996 Q8N2B8 174 aa15.44■□□□□ 0.06
SORT1-203ENST00000471996 NKX3-1Q99801 234 aaPredicted RBP15.44■□□□□ 0.06
SORT1-203ENST00000471996 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
SORT1-203ENST00000471996 ACOT8O14734 319 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 FAHP16930 419 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 SDHAP31040 664 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 TGM4P49221 684 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 SLC18A1P54219 525 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 MZT1Q08AG7 82 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 TRAP1Q12931 704 aaKnown RBP15.43■□□□□ 0.06
SORT1-203ENST00000471996 LRRC10Q5BKY1 277 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 CFAP77Q6ZQR2 320 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 RNF113BQ8IZP6 322 aaKnown RBP15.43■□□□□ 0.06
SORT1-203ENST00000471996 LRRC29Q8WV35 223 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 PITX2Q99697 317 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 ATF6BQ99941 703 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 RNPEPL1Q9HAU8 725 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 C14orf119Q9NWQ9 140 aa15.43■□□□□ 0.06
SORT1-203ENST00000471996 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.43■□□□□ 0.06
SORT1-203ENST00000471996 V9GYY5 206 aaPredicted RBP15.43■□□□□ 0.06
SORT1-203ENST00000471996 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.42■□□□□ 0.06
SORT1-203ENST00000471996 GGT3PA6NGU5 568 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 ANGPT2O15123 496 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 AMY2BP19961 511 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 GGT2P36268 569 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 MDH1P40925 334 aaKnown RBP15.42■□□□□ 0.06
SORT1-203ENST00000471996 GPR4P46093 362 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 CENPAP49450 140 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 ZNF92Q03936 586 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 NFYCQ13952 458 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 GPR139Q6DWJ6 353 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 HCP5Q6MZN7 132 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 SLC18B1Q6NT16 456 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 PTCHD4Q6ZW05 846 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 TSEN54Q7Z6J9 526 aaKnown RBP15.42■□□□□ 0.06
SORT1-203ENST00000471996 ADCK1Q86TW2 530 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 C11orf53Q8IXP5 236 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 H1FXQ92522 213 aaKnown RBP15.42■□□□□ 0.06
SORT1-203ENST00000471996 C12orf43Q96C57 262 aaKnown RBP15.42■□□□□ 0.06
SORT1-203ENST00000471996 NDEL1Q9GZM8 345 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 RABEP2Q9H5N1 569 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 ADA2Q9NZK5 511 aa15.42■□□□□ 0.06
SORT1-203ENST00000471996 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.41■□□□□ 0.06
SORT1-203ENST00000471996 IFNA14P01570 189 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 PAX6P26367 422 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 GRK5P34947 590 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 BMXP51813 675 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 TPTEP56180 551 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 TRAM2Q15035 370 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 ATPAF1Q5TC12 328 aaPredicted RBP15.41■□□□□ 0.06
SORT1-203ENST00000471996 TMPRSS11FQ6ZWK6 438 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 LINC00346Q8IVM7 164 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 OFCC1Q8IZS5 231 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 PIFOQ8TCI5 191 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 TSSK2Q96PF2 358 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 WNT10AQ9GZT5 417 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 PNRC2Q9NPJ4 139 aaKnown RBP15.41■□□□□ 0.06
SORT1-203ENST00000471996 NRIP3Q9NQ35 241 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 NKIRAS1Q9NYS0 192 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 RHCGQ9UBD6 479 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 CAPN7Q9Y6W3 813 aa15.41■□□□□ 0.06
SORT1-203ENST00000471996 DCTN6O00399 190 aa15.4■□□□□ 0.06
SORT1-203ENST00000471996 BHLHE40O14503 412 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms