RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZNF17P17021 662 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 MYL9P24844 172 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 CD70P32970 193 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 RBM34P42696 430 aaKnown RBP4.55□□□□□ -1.68
SMC5-202ENST00000471372 GALR1P47211 349 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 LHX2P50458 406 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 CDKN2DP55273 166 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 TAS2R46P59540 309 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 TMEM255AQ5JRV8 349 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 ACTL10Q5JWF8 245 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 FAM27D1Q5T7N8 215 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 C6orf120Q7Z4R8 191 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 C17orf78Q8N4C9 275 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 LINC00469Q8N7U9 141 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 Q8N9W7 124 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 DCPSQ96C86 337 aaKnown RBP4.55□□□□□ -1.68
SMC5-202ENST00000471372 HAUS1Q96CS2 278 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 TAAR1Q96RJ0 339 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 ARV1Q9H2C2 271 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 OR51B5Q9H339 312 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 SAV1Q9H4B6 383 aaPredicted RBP4.55□□□□□ -1.68
SMC5-202ENST00000471372 RRAGDQ9NQL2 400 aaPredicted RBP4.55□□□□□ -1.68
SMC5-202ENST00000471372 SDHAF2Q9NX18 166 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 STX18Q9P2W9 335 aaKnown RBP4.55□□□□□ -1.68
SMC5-202ENST00000471372 PRG3Q9Y2Y8 225 aaPredicted RBP4.55□□□□□ -1.68
SMC5-202ENST00000471372 ERI2A8K979 691 aaKnown RBP4.54□□□□□ -1.68
SMC5-202ENST00000471372 hCG_2039718K7EN88 272 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 CTSLP07711 333 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 CCNE1P24864 410 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 HTR2BP41595 481 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 RANBP1P43487 201 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 DNASE1L1P49184 302 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 OR1Q1Q15612 314 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 ZNF79Q15937 498 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 SPATA24Q86W54 205 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 ERO1BQ86YB8 467 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 NKAIN4Q8IVV8 208 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 CD302Q8IX05 232 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 OR10G4Q8NGN3 311 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 RXFP2Q8WXD0 754 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 C20orf144Q9BQM9 153 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 COPS4Q9BT78 406 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 CHAC1Q9BUX1 264 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 PARP12Q9H0J9 701 aaKnown RBP4.54□□□□□ -1.68
SMC5-202ENST00000471372 PLEKHA1Q9HB21 404 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 TMEM27Q9HBJ8 222 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 VAPAQ9P0L0 249 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 C15orf41Q9Y2V0 281 aa4.54□□□□□ -1.68
SMC5-202ENST00000471372 IGKV3D-20A0A0C4DH25 116 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 RNASEK-C17orf49H0YIS7 233 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 ZNF19P17023 458 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 SYNJ2BPP57105 145 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 SLC35A1P78382 337 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 PMS2P3Q13401 168 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 SYCP1Q15431 976 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 CLEC6AQ6EIG7 209 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 SPINK14Q6IE38 97 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 ADTRPQ96IZ2 230 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 FAM19A4Q96LR4 140 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 CYTH2Q99418 400 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 CIB1Q99828 191 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 TIMM29Q9BSF4 260 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 NDEL1Q9GZM8 345 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 ZNF442Q9H7R0 627 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 CACNG2Q9Y698 323 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 KIF25-AS1Q9Y6Z4 181 aa4.53□□□□□ -1.68
SMC5-202ENST00000471372 PALLDQ8WX93 1383 aa4.53□□□□□ -1.69
SMC5-202ENST00000471372 MN1Q10571 1320 aaPredicted RBP4.52□□□□□ -1.69
SMC5-202ENST00000471372 SCN2AQ99250 2005 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 IGHV2OR16-5A0A0B4J2B6 119 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 IGHV1-69DA0A0B4J2H0 117 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 INS-IGF2F8WCM5 200 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 LINC01619G3V211 115 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 CA11O75493 328 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 TTC4O95801 387 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 FADS2O95864 444 aaKnown RBP4.52□□□□□ -1.69
SMC5-202ENST00000471372 IGKV3-15P01624 115 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 BCHEP06276 602 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 TCN2P20062 427 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 UBE2AP49459 152 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 CCR6P51684 374 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 MAP3K7CLP57077 242 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 RBMY1FQ15415 496 aaKnown RBP4.52□□□□□ -1.69
SMC5-202ENST00000471372 ORMDL2Q53FV1 153 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 FBXW9Q5XUX1 488 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 SETD3Q86TU7 594 aaPredicted RBP4.52□□□□□ -1.69
SMC5-202ENST00000471372 FAM9CQ8IZT9 166 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 CA13Q8N1Q1 262 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 GTF2H4Q92759 462 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 TREX1Q9NSU2 369 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 CYB5R1Q9UHQ9 305 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 SIGLEC9Q9Y336 463 aa4.52□□□□□ -1.69
SMC5-202ENST00000471372 F8VP50 259 aa4.51□□□□□ -1.69
SMC5-202ENST00000471372 H0Y9J4 135 aa4.51□□□□□ -1.69
SMC5-202ENST00000471372 GATCO43716 136 aaKnown RBP4.51□□□□□ -1.69
SMC5-202ENST00000471372 ZNF861PO60384 105 aa4.51□□□□□ -1.69
SMC5-202ENST00000471372 SCN2BO60939 215 aa4.51□□□□□ -1.69
SMC5-202ENST00000471372 SEMA3DO95025 777 aa4.51□□□□□ -1.69
SMC5-202ENST00000471372 LDOC1O95751 146 aaPredicted RBP4.51□□□□□ -1.69
SMC5-202ENST00000471372 PCCAP05165 728 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms