RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 LOC100289279A0A1B0GTE1 492 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 CD37P11049 281 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 FAHP16930 419 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 CCNOP22674 350 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 ARR3P36575 388 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 CXADRP78310 365 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 FOXF2Q12947 444 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 TMEM53Q6P2H8 277 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 BAIAP2L2Q6UXY1 529 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 BCL2L2Q92843 193 aaPredicted RBP15.78■□□□□ 0.12
SMC4-211ENST00000469858 FOXRED1Q96CU9 486 aaPredicted RBP15.78■□□□□ 0.12
SMC4-211ENST00000469858 HAVCR1Q96D42 359 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 SORCS2Q96PQ0 1159 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 PIGLQ9Y2B2 252 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 ATMQ13315 3056 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 LOC100509620A0A075B734 347 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 SSX4O60224 188 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 ERCC1P07992 297 aaPredicted RBP15.78■□□□□ 0.12
SMC4-211ENST00000469858 TMIGD3P0DMS9 266 aaPredicted RBP15.78■□□□□ 0.12
SMC4-211ENST00000469858 CCL2P13500 99 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 ARSBP15848 533 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 INPP1P49441 399 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 EFNB2P52799 333 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 UCNP55089 124 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 PER3P56645 1201 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 PITPNAQ00169 270 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 RNASE12Q5GAN4 147 aaKnown RBP15.78■□□□□ 0.12
SMC4-211ENST00000469858 C1orf100Q5SVJ3 147 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 LYPD6Q86Y78 171 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 OR5AS1Q8N127 324 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 OR4D6Q8NGJ1 314 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 OR6K3Q8NGY3 331 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 SPACA5Q96QH8 159 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 METTL17Q9H7H0 456 aaPredicted RBP15.78■□□□□ 0.12
SMC4-211ENST00000469858 CNTD2Q9H8S5 307 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 B3GNT2Q9NY97 397 aa15.78■□□□□ 0.12
SMC4-211ENST00000469858 TMEM272A0A1B0GTI8 110 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 EEF1E1O43324 174 aaKnown RBP15.77■□□□□ 0.12
SMC4-211ENST00000469858 HLA-DQB1P01920 261 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 FAM87AP0C7U9 286 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 SPNP16150 400 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 IGHV1-2P23083 117 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 PRSS12P56730 875 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 TBRG1Q3YBR2 411 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 DMRTC1Q5HYR2 192 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 GDPD3Q7L5L3 318 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 RFT1Q96AA3 541 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 THAP7Q9BT49 309 aaPredicted RBP15.77■□□□□ 0.12
SMC4-211ENST00000469858 FAIMQ9NVQ4 179 aa15.77■□□□□ 0.12
SMC4-211ENST00000469858 INTS1Q8N201 2190 aaKnown RBP15.77■□□□□ 0.11
SMC4-211ENST00000469858 C5orf49A4QMS7 147 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 RAD51DO75771 328 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 LYZL6O75951 148 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 HCKP08631 526 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 CDK2P24941 298 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 STOMP27105 288 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 THBS4P35443 961 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 ZNF93P35789 620 aaPredicted RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 PLP2Q04941 152 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 ASAH1Q13510 395 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 SF3B4Q15427 424 aaKnown RBP eCLIP15.76■□□□□ 0.115e-8■■■■□ 22.8
SMC4-211ENST00000469858 GSG1Q2KHT4 349 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 KRTCAP3Q53RY4 240 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 TMEM69Q5SWH9 247 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 MYO7BQ6PIF6 2116 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 Q6ZSR3 168 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 CD163Q86VB7 1156 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 Q8NA96 180 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 CCDC54Q8NEL0 328 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 NANOS1Q8WY41 292 aaKnown RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 MYEF2Q9P2K5 600 aaKnown RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 RHBDD3Q9Y3P4 386 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 MBD3L4A6NDZ8 208 aaPredicted RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 MBD3L3A6NE82 208 aaPredicted RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 MBD3L5A6NJ08 208 aaPredicted RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 LANCL1O43813 399 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 COX5BP10606 129 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 EDN3P14138 238 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 GABRA1P14867 456 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 TGFBR3Q03167 851 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 ZNF57Q68EA5 555 aaPredicted RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 Q6ZT83 130 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 SEM1Q6ZVN7 128 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 SEMA6DQ8NFY4 1073 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 MBD3L2Q8NHZ7 208 aaPredicted RBP15.76■□□□□ 0.11
SMC4-211ENST00000469858 TRIM63Q969Q1 353 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 UQCC2Q9BRT2 126 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 C1QTNF5Q9BXJ0 243 aa15.76■□□□□ 0.11
SMC4-211ENST00000469858 IGKV1-9A0A0C4DH69 117 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 FIGNL2A6NMB9 653 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 PLA2G10O15496 165 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 WDR1O75083 606 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 ACKR3P25106 362 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 MMP15P51511 669 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 DGCR2P98153 550 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 ZNF324BQ6AW86 544 aaPredicted RBP15.75■□□□□ 0.11
SMC4-211ENST00000469858 RTL6Q6ICC9 239 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 RNF144BQ7Z419 303 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 NRARPQ7Z6K4 114 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 DPPA2Q7Z7J5 298 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms