RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
VARS2-205ENST00000469358 LPAR5Q9H1C0 372 aa10.72□□□□□ -0.69
VARS2-205ENST00000469358 MYOZ1Q9NP98 299 aaPredicted RBP10.72□□□□□ -0.69
VARS2-205ENST00000469358 COPS7AQ9UBW8 275 aa10.72□□□□□ -0.69
VARS2-205ENST00000469358 POLR1DQ9Y2S0 133 aa10.72□□□□□ -0.69
VARS2-205ENST00000469358 A0A1W2PPC4 97 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 E9PLN8 166 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 RER1O15258 196 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 EFNA2O43921 213 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 DUS4LO95620 317 aaKnown RBP10.71□□□□□ -0.69
VARS2-205ENST00000469358 PVALBP20472 110 aaPredicted RBP10.71□□□□□ -0.69
VARS2-205ENST00000469358 ARL4DP49703 201 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 TMEM50BP56557 158 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 S100A10P60903 97 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 CFHR1Q03591 330 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 FOXF1Q12946 379 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 RBM39Q14498 530 aaKnown RBP10.71□□□□□ -0.69
VARS2-205ENST00000469358 TOMM20Q15388 145 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 SHEQ5VZ18 495 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 LPCAT3Q6P1A2 487 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 CLEC18BQ6UXF7 455 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 BAP18Q8IXM2 172 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 THRSPQ92748 146 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 ARHGAP5-AS1Q96IT6 56 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 ZNF304Q9HCX3 659 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 ACKR4Q9NPB9 350 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 ZNF629Q9UEG4 869 aaPredicted RBP10.71□□□□□ -0.69
VARS2-205ENST00000469358 A0A1W2PNR3 127 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 RAMP1O60894 148 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 ISG15P05161 165 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 C1QL2Q7Z5L3 287 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 DTX1Q86Y01 620 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 OR10H5Q8NGA6 315 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 RNF133Q8WVZ7 376 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 LIN37Q96GY3 246 aaPredicted RBP10.71□□□□□ -0.69
VARS2-205ENST00000469358 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
VARS2-205ENST00000469358 CPAMD8Q8IZJ3 1885 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 TLCD2A6NGC4 264 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 ZNF814B7Z6K7 855 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 KNG1P01042 644 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 SERPINA5P05154 406 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 RAB32Q13637 225 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 NUP54Q7Z3B4 507 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 OR1N1Q8NGS0 311 aa10.71□□□□□ -0.7
VARS2-205ENST00000469358 MRPS28Q9Y2Q9 187 aaKnown RBP10.71□□□□□ -0.7
VARS2-205ENST00000469358 BLACEA4D250 179 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 FBXO24O75426 580 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 CRTAPO75718 401 aaPredicted RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 CD37P11049 281 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 FBLP22087 321 aaKnown RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 NME2P22392 152 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 FASLGP48023 281 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 BLKP51451 505 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 SUPT4H1P63272 117 aaKnown RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 MST1LQ2TV78 715 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 KLHL24Q6TFL4 600 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 HOGA1Q86XE5 327 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 SVBPQ8N300 66 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 SMIM3Q9BZL3 60 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 ASH2LQ9UBL3 628 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 ZNF175Q9Y473 711 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 C9JQL5 133 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 H3BMH7 237 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 SFTPBP07988 381 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 HCKP08631 526 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 FAM157CP0CG43 387 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 DHPSP49366 369 aaPredicted RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 FLI1Q01543 452 aaPredicted RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 PGAP1Q75T13 922 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 H1FNTQ75WM6 255 aaPredicted RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 NKAIN3Q8N8D7 197 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 ZDHHC22Q8N966 263 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 TERB2Q8NHR7 220 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 RAB3CQ96E17 227 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 GPER1Q99527 375 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 METTL8Q9H825 291 aaKnown RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 GPR84Q9NQS5 396 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 FBXO9Q9UK97 447 aaPredicted RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 ZNF98A6NK75 572 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 DBX1A6NMT0 343 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 LINC01387J3KSC0 135 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 GLI4P10075 376 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 SPP1P10451 314 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 TPT1P13693 172 aaKnown RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 MUC1P15941 1255 aaPredicted RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 ZNF20P17024 532 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 MMP16P51512 607 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 TDGQ13569 410 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 ARFRP1Q13795 201 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 RPL7L1Q6DKI1 246 aaKnown RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 OR5AS1Q8N127 324 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 DAZLQ92904 295 aaKnown RBP10.7□□□□□ -0.7
VARS2-205ENST00000469358 PHYHIPLQ96FC7 376 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 LHFPL6Q9Y693 200 aa10.7□□□□□ -0.7
VARS2-205ENST00000469358 MED19A0JLT2 244 aaPredicted RBP10.69□□□□□ -0.7
VARS2-205ENST00000469358 FGF16O43320 207 aa10.69□□□□□ -0.7
VARS2-205ENST00000469358 LRP3O75074 770 aa10.69□□□□□ -0.7
VARS2-205ENST00000469358 HLA-GP17693 338 aa10.69□□□□□ -0.7
VARS2-205ENST00000469358 RAB6AP20340 208 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms