RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 IFNA14P01570 189 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 VSIG10L2P0DP72 767 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 MDH1P40925 334 aaKnown RBP15.23■□□□□ 0.03
LINC00888-201ENST00000468380 FXYD6P3P58550 94 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 ZNF92Q03936 586 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 TRAP1Q12931 704 aaKnown RBP15.23■□□□□ 0.03
LINC00888-201ENST00000468380 MALLQ13021 153 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 CYLC2Q14093 348 aaPredicted RBP15.23■□□□□ 0.03
LINC00888-201ENST00000468380 GPR139Q6DWJ6 353 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 SLC18B1Q6NT16 456 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 CCBE1Q6UXH8 406 aaPredicted RBP15.23■□□□□ 0.03
LINC00888-201ENST00000468380 MRPL21Q7Z2W9 205 aaKnown RBP15.23■□□□□ 0.03
LINC00888-201ENST00000468380 VTCN1Q7Z7D3 282 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 FAM216BQ8N7L0 139 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 SPERTQ8NA61 448 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 BEND2Q8NDZ0 799 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 PITX2Q99697 317 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 SSX3Q99909 188 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 TMBIM4Q9HC24 238 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 RAB21Q9UL25 225 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 SIGLEC7Q9Y286 467 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 MAB21L2Q9Y586 359 aa15.23■□□□□ 0.03
LINC00888-201ENST00000468380 IGLV1-36A0A0B4J1U3 117 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 hCG_1807616A0A1W2PRN6 198 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 A6NLC8 198 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.22■□□□□ 0.03
LINC00888-201ENST00000468380 K7EIL1 84 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 IFNA8P32881 189 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 SNAI3Q3KNW1 292 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 WDR38Q5JTN6 314 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 C11orf88Q6PI97 169 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 TSEN54Q7Z6J9 526 aaKnown RBP15.22■□□□□ 0.03
LINC00888-201ENST00000468380 OR6V1Q8N148 313 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 OR2AE1Q8NHA4 323 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 RORBQ92753 470 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 DMRTB1Q96MA1 342 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 GPX7Q96SL4 187 aaPredicted RBP15.22■□□□□ 0.03
LINC00888-201ENST00000468380 ATF6BQ99941 703 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 SRA1Q9HD15 236 aaKnown RBP15.22■□□□□ 0.03
LINC00888-201ENST00000468380 PRPF19Q9UMS4 504 aaKnown RBP15.22■□□□□ 0.03
LINC00888-201ENST00000468380 B9D1Q9UPM9 204 aa15.22■□□□□ 0.03
LINC00888-201ENST00000468380 ADARB2-AS1A8MUL3 147 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 NDUFB2O95178 105 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 CD28P10747 220 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 PAX6P26367 422 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 GGT2P36268 569 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 UBE2E1P51965 193 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 PCK2Q16822 640 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 ERICH5Q6P6B1 374 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 WDR86Q86TI4 376 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 CMTM4Q8IZR5 234 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 SLC26A10Q8NG04 563 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 OR8J3Q8NGG0 315 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 OR4C13Q8NGP0 309 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 OR2T6Q8NHC8 308 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 FAM46AQ96IP4 442 aaKnown RBP15.21■□□□□ 0.03
LINC00888-201ENST00000468380 DCTN5Q9BTE1 182 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 MRPL15Q9P015 296 aaKnown RBP15.21■□□□□ 0.03
LINC00888-201ENST00000468380 AURKCQ9UQB9 309 aa15.21■□□□□ 0.03
LINC00888-201ENST00000468380 NOP16Q9Y3C1 178 aaKnown RBP15.21■□□□□ 0.03
LINC00888-201ENST00000468380 GGT3PA6NGU5 568 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 ACOT8O14734 319 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 TXNDC12O95881 172 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 SELLP14151 372 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 TGM4P49221 684 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 EMX1Q04741 257 aaPredicted RBP15.2■□□□□ 0.02
LINC00888-201ENST00000468380 ECH1Q13011 328 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 IKZF1Q13422 519 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 MICBQ29980 383 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 HCP5Q6MZN7 132 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 PGM2L1Q6PCE3 622 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 ADCK1Q86TW2 530 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 OR4S1Q8NGB4 309 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 R3HDM4Q96D70 268 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 SH3GL1Q99961 368 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 CYB5R1Q9UHQ9 305 aa15.2■□□□□ 0.02
LINC00888-201ENST00000468380 MUC1P15941 1255 aaPredicted RBP15.19■□□□□ 0.02
LINC00888-201ENST00000468380 CRABP1P29762 137 aa15.19■□□□□ 0.02
LINC00888-201ENST00000468380 TPTEP56180 551 aa15.19■□□□□ 0.02
LINC00888-201ENST00000468380 GLYATL3Q5SZD4 288 aa15.19■□□□□ 0.02
LINC00888-201ENST00000468380 OR5T2Q8NGG2 359 aa15.19■□□□□ 0.02
LINC00888-201ENST00000468380 C8orf46Q8TAG6 207 aa15.19■□□□□ 0.02
LINC00888-201ENST00000468380 LRRC29Q8WV35 223 aa15.19■□□□□ 0.02
LINC00888-201ENST00000468380 MAP6Q96JE9 813 aa15.19■□□□□ 0.02
LINC00888-201ENST00000468380 GMPR2Q9P2T1 348 aaKnown RBP15.19■□□□□ 0.02
LINC00888-201ENST00000468380 M0R135 149 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 NDUFB3O43676 98 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 CHST1O43916 411 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 TFF1P04155 84 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 IFNW1P05000 195 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 ACSM1Q08AH1 577 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 HABP2Q14520 560 aaPredicted RBP15.18■□□□□ 0.02
LINC00888-201ENST00000468380 RFX4Q33E94 735 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 ZBTB37Q5TC79 503 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 DPY19L2P2Q6ZN68 376 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 SLC36A1Q7Z2H8 476 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 LNX2Q8N448 690 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 OR56B2PQ8NGI1 322 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 PIFOQ8TCI5 191 aa15.18■□□□□ 0.02
LINC00888-201ENST00000468380 SLC7A13Q8TCU3 470 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms