RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 GABRB1P18505 474 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 TSPAN7P41732 249 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 MEOX1P50221 254 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 IRF3Q14653 427 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 MESTQ5EB52 335 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 ZNF770Q6IQ21 691 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-203ENST00000467558 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 ZDHHC23Q8IYP9 409 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SLC7A5P1Q8MH63 180 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 OR6K3Q8NGY3 331 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 TECTBQ96PL2 329 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SLC17A5Q9NRA2 495 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 KLK11Q9UBX7 282 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 TPRP12270 2363 aaKnown RBP12.33□□□□□ -0.44
BRAT1-203ENST00000467558 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
BRAT1-203ENST00000467558 NGFRP08138 427 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 S100A11P31949 105 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 DCTDP32321 178 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SCAND1P57086 179 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 RAB1AP62820 205 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 FUT5Q11128 374 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 LTC4SQ16873 150 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 B3GNTL1Q67FW5 361 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SLC25A26Q70HW3 274 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SLCO1B1Q9Y6L6 691 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 DOCK6Q96HP0 2047 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SPINT2O43291 252 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SEMG1P04279 462 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-203ENST00000467558 CREB3L2Q70SY1 520 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 BTLAQ7Z6A9 289 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 MFSD4AQ8N468 514 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 MRPS18AQ9NVS2 196 aaKnown RBP12.33□□□□□ -0.44
BRAT1-203ENST00000467558 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 SIP14410 1827 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 CCDC88CQ9P219 2028 aa12.33□□□□□ -0.44
BRAT1-203ENST00000467558 MN1Q10571 1320 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-203ENST00000467558 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 SIX6O95475 246 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 FUT6P51993 359 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 MC2RQ01718 297 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 PLA2G7Q13093 441 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 PRRX2Q99811 253 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 UQCC2Q9BRT2 126 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.32□□□□□ -0.44
BRAT1-203ENST00000467558 LRRC30A6NM36 301 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 F8W036 122 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 MSTNO14793 375 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 OGG1O15527 345 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 EDN3P14138 238 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 GNB3P16520 340 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
BRAT1-203ENST00000467558 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-203ENST00000467558 PHLDA2Q53GA4 152 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 PRSS27Q9BQR3 290 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 MRM2Q9UI43 246 aaKnown RBP12.32□□□□□ -0.44
BRAT1-203ENST00000467558 CNOT1A5YKK6 2376 aaKnown RBP12.32□□□□□ -0.44
BRAT1-203ENST00000467558 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 HS3ST1O14792 307 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 AQP8O94778 261 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 RAD52P43351 418 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 EDDM3BP56851 147 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 ZNF718Q3SXZ3 478 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 ASB10Q8WXI3 467 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 EGLN1Q9GZT9 426 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 CCDC86Q9H6F5 360 aaKnown RBP12.32□□□□□ -0.44
BRAT1-203ENST00000467558 APC2O95996 2303 aa12.32□□□□□ -0.44
BRAT1-203ENST00000467558 PTP4A3O75365 173 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 IFNA17P01571 189 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
BRAT1-203ENST00000467558 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 SLC51BQ86UW2 128 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 BATF2Q8N1L9 274 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 OR10J5Q8NHC4 309 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 ZNF416Q9BWM5 594 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 PLK3Q9H4B4 646 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 NTMQ9P121 344 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 ST3GAL6Q9Y274 331 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 A0A1B0GTH9 108 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 RGS11O94810 467 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 KIR2DL3P43628 341 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 PLGLAQ15195 96 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 FAAP20Q6NZ36 180 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 SAP25Q8TEE9 199 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 UPRTQ96BW1 309 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 DDOQ99489 341 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 SF3B5Q9BWJ5 86 aaKnown RBP12.31□□□□□ -0.44
BRAT1-203ENST00000467558 NMNAT2Q9BZQ4 307 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 KIF25Q9UIL4 384 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 COPS3Q9UNS2 423 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 GREB1Q4ZG55 1949 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 TEX51A0A1B0GUA7 166 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 A0A1B0GUH1 482 aa12.31□□□□□ -0.44
BRAT1-203ENST00000467558 SNRPGP15A8MWD9 76 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms