RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 KIF27Q86VH2 1401 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 GABRR3A8MPY1 467 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 KRBOX1C9JBD0 128 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 H3BN98 237 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 CHST10O43529 356 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 MPDU1O75352 247 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 OTCP00480 354 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 CD74P04233 296 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 ADRA2AP08913 450 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 TCP1P17987 556 aaKnown RBP2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 TUBG1P23258 451 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 BCAP31P51572 246 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 LINC00315P59091 139 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC39A6Q13433 755 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 PNOCQ13519 176 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 LINC00336Q6ZUF6 198 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 ARRDC1Q8N5I2 433 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 C19orf18Q8NEA5 215 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR52K1Q8NGK4 314 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 ASZ1Q8WWH4 475 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 DYNLL2Q96FJ2 89 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF488Q96MN9 340 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 UQCC2Q9BRT2 126 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 C1orf198Q9H425 327 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 CYP3A43Q9HB55 503 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 TUBG2Q9NRH3 451 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 RGS18Q9NS28 235 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 OPN4Q9UHM6 478 aa2.61□□□□□ -1.99
CDC42BPA-211ENST00000466538 SMIM26A0A096LP01 95 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 A0A0J9YYE9 177 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 A0A1W2PRF3 423 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 A0A1W2PRM7 423 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 TMEM150BA6NC51 233 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 LRCOL1A6NCL2 159 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 H0YJW9 148 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 NMT2O60551 498 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC16A7O60669 478 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 EIF1BO60739 113 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 GLSO94925 669 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 PTHP01270 115 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 TRBC1P01850 177 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 CRYGCP07315 174 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 LINC00869P0C866 280 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 CD37P11049 281 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 GABRG2P18507 467 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 IL1RNP18510 177 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 EIF1P41567 113 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 PSMD4P55036 377 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 TAS2R46P59540 309 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 LCN2P80188 198 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 CDK5Q00535 292 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 RPL18AQ02543 176 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 PPIDQ08752 370 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 GABRA6Q16445 453 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 SNRNP35Q16560 246 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 HSP90AA4PQ58FG1 418 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC35D2Q76EJ3 337 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR2W3Q7Z3T1 314 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF321PQ8N8H1 164 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 NECAP1Q8NC96 275 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR10Z1Q8NGY1 313 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 LINC01560Q8TB33 94 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF707Q96C28 371 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 FGF23Q9GZV9 251 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 NAA50Q9GZZ1 169 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 REEP1Q9H902 201 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 ADA2Q9NZK5 511 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 ENOPH1Q9UHY7 261 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 MROH7Q68CQ1 1323 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 SBNO1A3KN83 1393 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 TNIKQ9UKE5 1360 aa2.6□□□□□ -1.99
CDC42BPA-211ENST00000466538 ARID1AO14497 2285 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 TNS2Q63HR2 1409 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 PLA2R1Q13018 1463 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 A0A1B0GUH1 482 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 A0A1W2PPV4 95 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 GOLGA8JA6NMD2 632 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 CENPXA8MT69 81 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 HACD1B0YJ81 288 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 NEMFO60524 1076 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 PAHP00439 452 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 CATP04040 527 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 GOLGA8HP0CJ92 632 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 PMCHP20382 165 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 POLR2IP36954 125 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 CSKP41240 450 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 CACNG7P62955 275 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZFP1Q6P2D0 407 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 CD300LGQ6UXG3 332 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 TMPRSS11AQ6ZMR5 421 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 RTL4Q6ZR62 310 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 MDP1Q86V88 176 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 TMEM256Q8N2U0 113 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 TRAM1L1Q8N609 369 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 DOK1Q99704 481 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 RBBP8Q99708 897 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 TBL1YQ9BQ87 522 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 TMEM243Q9BU79 118 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 GGTLC1Q9BX51 225 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms