RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 HIST2H3PS2Q5TEC6 136 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 MEDAGQ5VYS4 303 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 MBNL2Q5VZF2 373 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 CD300LDQ6UXZ3 194 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 HIST2H3AQ71DI3 136 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 NAA40Q86UY6 237 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 BHLHE23Q8NDY6 225 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 BBS1Q8NFJ9 593 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 OR10S1Q8NGN2 331 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 RDH5Q92781 318 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 ZMYND19Q96E35 227 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 COPS4Q9BT78 406 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 CHODLQ9H9P2 273 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 SAP30LQ9HAJ7 183 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF275Q9NSD4 429 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PAK1IP1Q9NWT1 392 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 CLN6Q9NWW5 311 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 TVP23BQ9NYZ1 205 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 DNAJC27Q9NZQ0 273 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 CYB5R1Q9UHQ9 305 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 KCNG2Q9UJ96 466 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PURGQ9UJV8 347 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 CACNG2Q9Y698 323 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 IGHV3-64DA0A0J9YX35 117 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ISPDA4D126 451 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 M0R135 149 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF593O00488 134 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 SELENOFO60613 162 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 IGHV1-46P01743 117 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 MRPL3P09001 348 aaKnown RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ACSM4P0C7M7 580 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 PIPP12273 146 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 PSMB9P28065 219 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 IL2RGP31785 369 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 MMP15P51511 669 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 SLC25A1P53007 311 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 CRISP1P54107 249 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 TPTEP56180 551 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 RIPPLY3P57055 190 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 EMX1Q04741 257 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 LOXL1Q08397 574 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 TMED1Q13445 227 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 SNAPC1Q16533 368 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 SPRNQ5BIV9 151 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 LINC01590Q5TEZ4 76 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 OR2T2Q6IF00 324 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 GDPGP1Q6ZNW5 385 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 Q6ZNX1 250 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 USP43Q70EL4 1123 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 CXXC5Q7LFL8 322 aaKnown RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF367Q7RTV3 350 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 DPY19L4Q7Z388 723 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 CPOQ8IVL8 374 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 STX19Q8N4C7 294 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF283Q8N7M2 679 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 OR2Z1Q8NG97 314 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 RHOXF1Q8NHV9 184 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 SPTSSAQ969W0 71 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 APOBEC3DQ96AK3 386 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 SLAMF6Q96DU3 332 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 YIPF6Q96EC8 236 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF799Q96GE5 643 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 INTS14Q96SY0 518 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 TTTY10Q9BZA0 68 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 NMNAT2Q9BZQ4 307 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 MMP27Q9H306 513 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 SLC25A19Q9HC21 320 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ACOT13Q9NPJ3 140 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 PNRC2Q9NPJ4 139 aaKnown RBP8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 MALRD1Q5VYJ5 2156 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 ABCA1O95477 2261 aa8.29□□□□□ -1.08
RTFDC1-205ENST00000466260 IGHV1-69-2A0A0G2JMI3 117 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 A6NJY4 79 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF878C9JN71 531 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 TBX1O43435 398 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 CD5LO43866 347 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 ICMTO60725 284 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 GLCEO94923 617 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 HMGN1P05114 100 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 CDK1P06493 297 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 ANXA2P07355 339 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 IGHV4-31P0DP07 118 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 ACHEP22303 614 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 ANOS1P23352 680 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 HSD11B1P28845 292 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 CD40LGP29965 261 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 SOX6P35712 828 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 RGS6P49758 472 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 TNFAIP6P98066 277 aaPredicted RBP8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 CDK5Q00535 292 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 PTGES3Q15185 160 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 GFOD2Q3B7J2 385 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 PCGF3Q3KNV8 242 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 SNAI3Q3KNW1 292 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 RNLSQ5VYX0 342 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 MRPL21Q7Z2W9 205 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 BCDIN3DQ7Z5W3 292 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF554Q86TJ5 538 aa8.28□□□□□ -1.08
RTFDC1-205ENST00000466260 C1orf174Q8IYL3 243 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms