RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TRAP1Q12931 704 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CCNIQ14094 377 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 TRIP10Q15642 601 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC36A2Q495M3 483 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 RNASE12Q5GAN4 147 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 ELFN2Q5R3F8 820 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 HIST2H3PS2Q5TEC6 136 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 FAM205BPQ63HN1 556 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 ACSM5Q6NUN0 579 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CFAP77Q6ZQR2 320 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 HIST2H3AQ71DI3 136 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 HDDC2Q7Z4H3 204 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 BIVMQ86UB2 503 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 NAA40Q86UY6 237 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 LINC00346Q8IVM7 164 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 ARHGAP24Q8N264 748 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 AQP11Q8NBQ7 271 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 ICA1LQ8NDH6 482 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 OR51L1Q8NGJ5 315 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 OR10S1Q8NGN2 331 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 OR9Q1Q8NGQ5 310 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC25A40Q8TBP6 338 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 GNPDA2Q8TDQ7 276 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 IPCEF1Q8WWN9 437 aaPredicted RBP4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 C11orf40Q8WZ69 217 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 YIPF5Q969M3 257 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 MCUR1Q96AQ8 359 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 FEVQ99581 238 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 WACQ9BTA9 647 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CHID1Q9BWS9 393 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 DGCR6LQ9BY27 220 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 NMNAT2Q9BZQ4 307 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 TRIM15Q9C019 465 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 OR2J1Q9GZK6 312 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 MUC13Q9H3R2 512 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 MAGIXQ9H6Y5 334 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CCNB1IP1Q9NPC3 277 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 DCAF16Q9NXF7 216 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 IL20Q9NYY1 176 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 TAAR3PQ9P1P4 343 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 TMCC3Q9ULS5 477 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 B9D1Q9UPM9 204 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 STARD10Q9Y365 291 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 SAMHD1Q9Y3Z3 626 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CMAHPQ9Y471 501 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CACNG2Q9Y698 323 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CDH10Q9Y6N8 788 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 WNK2Q9Y3S1 2297 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 A0A087WWL8 130 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 IQCMA0A1B0GVH7 501 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 LRP5LA4QPB2 252 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 OR6C6A6NF89 314 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TVP23AA6NH52 213 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 ZSCAN5BA6NJL1 495 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 FAM183AA6NL82 134 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 AQP12BA6NM10 295 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 M0R129 80 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 AP4M1O00189 453 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 XKRYO14609 159 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 SGCEO43556 437 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 DOK2O60496 412 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 MITFO75030 526 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 FKBP6O75344 327 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 KHDRBS3O75525 346 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 KRT36O76013 467 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 STAMBPO95630 424 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 IGHV3-13P01766 116 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 IGHV4-31P0DP07 118 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 APEHP13798 732 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 DAOP14920 347 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 PAX7P23759 505 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 EPHA2P29317 976 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC6A6P31641 620 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 APLNRP35414 380 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 GGT2P36268 569 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 HTR5AP47898 357 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 CENPAP49450 140 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 DAPP51397 102 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 MMP15P51511 669 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 RPS6KA3P51812 740 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 SMIM11AP58511 58 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 SNRPD2P62316 118 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 CCL8P80075 99 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 CBX1P83916 185 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 GALK2Q01415 458 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 CRMP1Q14194 572 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 FLOT2Q14254 428 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 CARTPTQ16568 116 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TBC1D28Q2M2D7 210 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TMEM249Q2WGJ8 235 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 KRTAP27-1Q3LI81 207 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC36A3Q495N2 470 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 FAM98BQ52LJ0 330 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 PXDC1Q5TGL8 231 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TMEM236Q5W0B7 351 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 GPR139Q6DWJ6 353 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TMEM154Q6P9G4 183 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 Q6ZR03 302 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 RASSF6Q6ZTQ3 369 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 ADCK1Q86TW2 530 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms