RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ZNF14P17017 642 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 RAB5AP20339 215 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 HNRNPA2B1P22626 353 aaKnown RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 MAS1LP35410 378 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 EIF2S3P41091 472 aaKnown RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 NPY4RP50391 375 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 SLC37A1P57057 533 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 PPP1CAP62136 330 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 FAM3AP98173 230 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 TDGQ13569 410 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 SURF2Q15527 256 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 C1orf140Q5VVS0 124 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ARMC6Q6NXE6 501 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 DCXRQ7Z4W1 244 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OR5H2Q8NGV7 314 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 GPBAR1Q8TDU6 330 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 TRIM43Q96BQ3 446 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 SLC25A36Q96CQ1 311 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 TMEM41AQ96HV5 264 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 AKR1E2Q96JD6 320 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 NAA11Q9BSU3 229 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 RNF208Q9H0X6 261 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ARV1Q9H2C2 271 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 RPS10P5Q9NQ39 176 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 CUTCQ9NTM9 273 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 DZANK1Q9NVP4 752 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 PPP4R1LQ9P1A2 415 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 MIOXQ9UGB7 285 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OSGIN2Q9Y236 505 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 RPH3AQ9Y2J0 694 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 TMED7-TICAM2A0A0A6YYA0 188 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 A0A0A6YYD4 124 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 LOC101059948A0A1B0GTJ6 334 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 A0A1W2PPE3 182 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 C7orf77A4D0Y5 90 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 NPIPB13A6NJU9 1138 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 NPIPB4C9JG80 1138 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 TO15178 435 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 SYT7O43581 403 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 MPZL1O95297 269 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 AHSA1O95433 338 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 TTRP02766 147 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OR8U8P0C7N1 319 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OR8U9P0C7N5 309 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ZNF708P17019 499 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ACKR3P25106 362 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 NTSR1P30989 418 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 GNALP38405 381 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ZNF84P51523 738 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 P2RY4P51582 365 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 CLDN6P56747 220 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 TAS2R46P59540 309 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 YPEL5P62699 121 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 GPM6BQ13491 265 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ERV3-1Q14264 604 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 EBPQ15125 230 aaKnown RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 RHEBQ15382 184 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 AWAT1Q58HT5 328 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 PTCRAQ6ISU1 281 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 ZNF600Q6ZNG1 722 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 C1QL4Q86Z23 238 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OR5D14Q8NGL3 314 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OR2I1PQ8NGU4 316 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OR13G1Q8NGZ3 307 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 OR8U1Q8NH10 309 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 KCNG3Q8TAE7 436 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 SECTM1Q8WVN6 248 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 PATE1Q8WXA2 126 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ASB10Q8WXI3 467 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 EMG1Q92979 244 aaKnown RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 RAB3CQ96E17 227 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 ADAT3Q96EY9 351 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 CNTNAP3Q9BZ76 1288 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 C8orf33Q9H7E9 229 aaPredicted RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 METTL8Q9H825 291 aaKnown RBP6.48□□□□□ -1.37
USP48-206ENST00000464577 LMAN1LQ9HAT1 526 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP48-206ENST00000464577 GHRLQ9UBU3 117 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 SUSD2Q9UGT4 822 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 LRP4O75096 1905 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 PMS2P1A4D2B8 440 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 A6NLC8 198 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 ALG1L2C9J202 215 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 C5orf67F2Z3F1 127 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 K7EPK0 472 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 AP4M1O00189 453 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 CDC14BO60729 498 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 CLN5O75503 358 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 HTR3BO95264 441 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 LAP3P28838 519 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 THBS4P35443 961 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 ZNF93P35789 620 aaPredicted RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 SNCAP37840 140 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 ECI1P42126 302 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 DAP3P51398 398 aaKnown RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 SUCLG1P53597 346 aaKnown RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 S100A10P60903 97 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 DCAF7P61962 342 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms