RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MTFP1Q9UDX5 166 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 ECDO95905 644 aaPredicted RBP11.21□□□□□ -0.62
VAPB-203ENST00000463370 CD46P15529 392 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 FAHP16930 419 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 OR3A4PP47883 348 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 RRAS2P62070 204 aaPredicted RBP11.21□□□□□ -0.62
VAPB-203ENST00000463370 PSG4Q00888 419 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 PCGF3Q3KNV8 242 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 RIPPLY2Q5TAB7 128 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 CRIP3Q6Q6R5 217 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 NPRL2Q8WTW4 380 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 HAS2Q92819 552 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 TMEM45BQ96B21 275 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 FOXRED1Q96CU9 486 aaPredicted RBP11.21□□□□□ -0.62
VAPB-203ENST00000463370 SCMH1Q96GD3 660 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 C20orf85Q9H1P6 137 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 GHITMQ9H3K2 345 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 GVINP1Q7Z2Y8 2422 aa11.21□□□□□ -0.62
VAPB-203ENST00000463370 TNFRSF10AO00220 468 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 MRPL33O75394 65 aaKnown RBP11.2□□□□□ -0.62
VAPB-203ENST00000463370 SOX8P57073 446 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 RAB35Q15286 201 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 GSG1Q2KHT4 349 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 BTN2A1Q7KYR7 527 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 MEIOBQ8N635 442 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 DVL3Q92997 716 aaPredicted RBP11.2□□□□□ -0.62
VAPB-203ENST00000463370 PHF21AQ96BD5 680 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SGK3Q96BR1 496 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 WNT5BQ9H1J7 359 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 OR10A4Q9H209 315 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SPRR3Q9UBC9 169 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 A0A0U1RQV5 110 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 A0A1W2PP11 408 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 C7orf66A4D0T2 115 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SMLR1H3BR10 107 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 RBBP9O75884 186 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 H2AFB2P0C5Z0 115 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 PRSS3P35030 304 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 TNFSF10P50591 281 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SLC10A1Q14973 349 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 UBE2V2Q15819 145 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 ZFP69Q49AA0 526 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 OLFML2AQ68BL7 652 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 AWAT2Q6E213 333 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SLC16A14Q7RTX9 510 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 TMEM104Q8NE00 496 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 OR1F12Q8NHA8 337 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 GIMAP1Q8WWP7 306 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SPTSSAQ969W0 71 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SEH1LQ96EE3 360 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 C1orf147Q96MC9 270 aaPredicted RBP11.2□□□□□ -0.62
VAPB-203ENST00000463370 UQCC2Q9BRT2 126 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 SLCO5A1Q9H2Y9 848 aa11.2□□□□□ -0.62
VAPB-203ENST00000463370 A0A096LPE4 126 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 A0A1W2PPZ6 126 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 OR6C6A6NF89 314 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 TMEM235A6NFC5 223 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 RAB27BO00194 218 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 TPPPO94811 219 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 ACKR3P25106 362 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 VEGFCP49767 419 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 RRADP55042 308 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 AP3S2P59780 193 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 FCN2Q15485 313 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 FAM109AQ8N4B1 249 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 OR4C16Q8NGL9 310 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 OR8S1Q8NH09 359 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 GPX8Q8TED1 209 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 SSC4DQ8WTU2 575 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 AKAP1Q92667 903 aaKnown RBP eCLIP11.19□□□□□ -0.624e-9■■■■■ 30.8
VAPB-203ENST00000463370 NICN1Q9BSH3 213 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 OR2H1Q9GZK4 316 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 ZNF224Q9NZL3 707 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 V9GYS6 101 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 TM4SF5O14894 197 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 DHRS3O75911 302 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 SYNGR4O95473 234 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 TGM6O95932 706 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 DHFRP00374 187 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 HCKP08631 526 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 PSMB1P20618 241 aaKnown RBP11.19□□□□□ -0.62
VAPB-203ENST00000463370 NBL1P41271 181 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 HTR5AP47898 357 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 NOVA1P51513 510 aaKnown RBP11.19□□□□□ -0.62
VAPB-203ENST00000463370 ST3GAL2Q16842 350 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 GLIPR1L1Q6UWM5 242 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 PGAP1Q75T13 922 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 NUFIP2Q7Z417 695 aaKnown RBP11.19□□□□□ -0.62
VAPB-203ENST00000463370 OR5D18Q8NGL1 313 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 ACKR4Q9NPB9 350 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 MCTS1Q9ULC4 181 aaKnown RBP11.19□□□□□ -0.62
VAPB-203ENST00000463370 PIGLQ9Y2B2 252 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
VAPB-203ENST00000463370 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
VAPB-203ENST00000463370 ZNF503-AS2A6NEH8 195 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms