RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 PRPSAP1Q14558 356 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 ZNF79Q15937 498 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 CPTPQ5TA50 214 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 HES5Q5TA89 166 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 KDM4DQ6B0I6 523 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 ZNF470Q6ECI4 717 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 OR2T5Q6IEZ7 315 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 COX18Q8N8Q8 333 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 OR2L5Q8NG80 312 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 OR11H7Q8NGC8 314 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 OR6N2Q8NGY6 317 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 OR2T29Q8NH02 315 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 CDKL2Q92772 493 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 NAPGQ99747 312 aaPredicted RBP2.74□□□□□ -1.97
USH2A-203ENST00000463147 SLC25A2Q9BXI2 301 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 SAMD10Q9BYL1 202 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 SAV1Q9H4B6 383 aaPredicted RBP2.74□□□□□ -1.97
USH2A-203ENST00000463147 RGS18Q9NS28 235 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 ZNHIT6Q9NWK9 470 aaKnown RBP2.74□□□□□ -1.97
USH2A-203ENST00000463147 MS4A12Q9NXJ0 267 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 ENPP5Q9UJA9 477 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 TSSC4Q9Y5U2 329 aaPredicted RBP2.74□□□□□ -1.97
USH2A-203ENST00000463147 TDRD6O60522 2096 aaKnown RBP2.73□□□□□ -1.97
USH2A-203ENST00000463147 IGKV1-27A0A075B6S5 117 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 SYCE1LA8MT33 242 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 LINC01619G3V211 115 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 ALOX12BO75342 701 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 SMC2O95347 1197 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 IGLV1-47P01700 117 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 RETP07949 1114 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 ELK1P19419 428 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 RAB3AP20336 220 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 P2RX1P51575 399 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 MLF1P58340 268 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 EIF4EBP2Q13542 120 aaPredicted RBP2.73□□□□□ -1.97
USH2A-203ENST00000463147 KIR2DS1Q14954 304 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 CHRFAM7AQ494W8 412 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 FAHD1Q6P587 224 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 COMTD1Q86VU5 262 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 METTL13Q8N6R0 699 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 OR6K6Q8NGW6 343 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 OR6X1Q8NH79 312 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 ZFP90Q8TF47 636 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 TMEM234Q8WY98 164 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 FAM104AQ969W3 186 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 RCN3Q96D15 328 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 BTN2A3PQ96KV6 586 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 C20orf144Q9BQM9 153 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 LLPHQ9BRT6 129 aaKnown RBP2.73□□□□□ -1.97
USH2A-203ENST00000463147 BEX2Q9BXY8 128 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 OR52A5Q9H2C5 316 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 OR51B5Q9H339 312 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 GOLPH3Q9H4A6 298 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 RRAGDQ9NQL2 400 aaPredicted RBP2.73□□□□□ -1.97
USH2A-203ENST00000463147 NEU3Q9UQ49 428 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 CACNG2Q9Y698 323 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 PIKFYVEQ9Y2I7 2098 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 PALLDQ8WX93 1383 aa2.73□□□□□ -1.97
USH2A-203ENST00000463147 ARHGAP21Q5T5U3 1957 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 IGHV3-74A0A0B4J1X5 117 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 IGHV3OR16-9A0A0B4J2B5 98 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 IGHV3-64DA0A0J9YX35 117 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 ERICH2A1L162 156 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 LAD1O00515 517 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 HAT1O14929 419 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 GABARAPO95166 117 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 RPN2P04844 631 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 PCCAP05165 728 aaPredicted RBP2.72□□□□□ -1.97
USH2A-203ENST00000463147 GLAP06280 429 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 RHOCP08134 193 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 WARSP23381 471 aaKnown RBP2.72□□□□□ -1.97
USH2A-203ENST00000463147 KIR3DL2P43630 455 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 CYB561P49447 251 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 VSX2P58304 361 aaPredicted RBP2.72□□□□□ -1.97
USH2A-203ENST00000463147 HERVK_113P61574 105 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 LRRC63Q05C16 580 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 TCP10Q12799 353 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 PRSS8Q16651 343 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 ACTL10Q5JWF8 245 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 THEM4Q5T1C6 240 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 FBXW9Q5XUX1 488 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 PDPK2PQ6A1A2 396 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 C6orf120Q7Z4R8 191 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 TMEM25Q86YD3 366 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 C15orf56Q8N910 161 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 LINC00167Q96N53 147 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 C18orf15Q96N68 181 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 TAAR1Q96RJ0 339 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 ULBP2Q9BZM5 246 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 ARV1Q9H2C2 271 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 LINC00597Q9H2U6 94 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 PLEKHA1Q9HB21 404 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 SLC40A1Q9NP59 571 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 ISYNA1Q9NPH2 558 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 MED4Q9NPJ6 270 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 RBFOX1Q9NWB1 397 aaKnown RBP2.72□□□□□ -1.97
USH2A-203ENST00000463147 MAT2BQ9NZL9 334 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 CYB5R1Q9UHQ9 305 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 VAX2Q9UIW0 290 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms