RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 C17orf107Q6ZR85 190 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 LNX2Q8N448 690 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 TMEM86BQ8N661 226 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 PROKR2Q8NFJ6 384 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 OR56B2PQ8NGI1 322 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 OR51L1Q8NGJ5 315 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 GNPDA2Q8TDQ7 276 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 WDFY2Q96P53 400 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 SIRPDQ9H106 197 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 MRPL15Q9P015 296 aaKnown RBP13.33□□□□□ -0.28
COL7A1-204ENST00000462475 KIF17Q9P2E2 1029 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 MAGEL2Q9UJ55 1249 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 CDH10Q9Y6N8 788 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 COMMD3-BMI1R4GMX3 469 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 DOCK11Q5JSL3 2073 aa13.33□□□□□ -0.28
COL7A1-204ENST00000462475 TRAV38-1A0A0B4J264 116 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 A6NLC8 198 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 BHLHE40O14503 412 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 ARPC2O15144 300 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 NDUFA7O95182 113 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 CRYBA1P05813 215 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 LIPFP07098 398 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 GRPP07492 148 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 OLFML2AQ68BL7 652 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 DRAM2Q6UX65 266 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 DCXRQ7Z4W1 244 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 FAM90A1Q86YD7 464 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 GCSAMQ8N6F7 178 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 PNLDC1Q8NA58 520 aaKnown RBP13.32□□□□□ -0.28
COL7A1-204ENST00000462475 PLPP7Q8NBV4 271 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 OR9Q2Q8NGE9 314 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 OR8D4Q8NGM9 314 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 OR9Q1Q8NGQ5 310 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 GATAD2BQ8WXI9 593 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 MCUR1Q96AQ8 359 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 FAM71F1Q96KD3 344 aaPredicted RBP13.32□□□□□ -0.28
COL7A1-204ENST00000462475 ELAC2Q9BQ52 826 aaKnown RBP13.32□□□□□ -0.28
COL7A1-204ENST00000462475 COPS4Q9BT78 406 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 NOTCH1P46531 2555 aa13.32□□□□□ -0.28
COL7A1-204ENST00000462475 IGHV3OR15-7A0A075B7D8 119 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 hCG_1807616A0A1W2PRN6 198 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 HSD17B1P14061 328 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 PRKXP51817 358 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 POU4F2Q12837 409 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 METTL11BQ5VVY1 283 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 BRICD5Q6PL45 260 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 ZDHHC21Q8IVQ6 265 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 FGFRL1Q8N441 504 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 SLC37A3Q8NCC5 494 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 OR52L1Q8NGH7 329 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 OR2T4Q8NH00 348 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 LHX4Q969G2 390 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 NSMCE2Q96MF7 247 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 CITED1Q99966 193 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 BTBD10Q9BSF8 475 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 IL1RAPQ9NPH3 570 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 TRIM36Q9NQ86 728 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 ACOXLQ9NUZ1 547 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 N6AMT1Q9Y5N5 214 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 POMT1Q9Y6A1 747 aa13.31□□□□□ -0.28
COL7A1-204ENST00000462475 IGHV1-69DA0A0B4J2H0 117 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 A0A0U1RQK1 487 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 A0A1B0GW55 424 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DVL1O14640 695 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 NDUFA2O43678 99 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 IGHV1-69P01742 117 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 IGHV4-59P01825 116 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 SPARCP09486 303 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4L2P0CJ85 424 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4L3P0CJ86 424 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4L4P0CJ87 422 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4L5P0CJ88 424 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4L6P0CJ89 424 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4L7P0CJ90 424 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 ARF6P62330 175 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 ELF3P78545 371 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-204ENST00000462475 HSP90B2PQ58FF3 399 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4L9Q6RFH8 374 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-204ENST00000462475 BTN2A1Q7KYR7 527 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 WDR86Q86TI4 376 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 PDZD9Q8IXQ8 264 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 SPERTQ8NA61 448 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 OR4C15Q8NGM1 316 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 SLAMF6Q96DU3 332 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 CENPMQ9NSP4 180 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 DUX4Q9UBX2 424 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 CD300AQ9UGN4 299 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 LYVE1Q9Y5Y7 322 aa13.3□□□□□ -0.28
COL7A1-204ENST00000462475 LHBP01229 141 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 GYPBP06028 91 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 ENTPD1P49961 510 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 CRMP1Q14194 572 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 PDCD1Q15116 288 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 OCLNQ16625 522 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 PCK2Q16822 640 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 TEX36Q5VZQ5 186 aa13.29□□□□□ -0.28
COL7A1-204ENST00000462475 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms