RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 IGHV2-5P01817 119 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PPIAL4FP0DN26 164 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 SLC2A1P11166 492 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PRKACGP22612 351 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 CA6P23280 308 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 IL2RGP31785 369 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 RPS27P42677 84 aaKnown RBP7.58□□□□□ -1.2
DDX39B-216ENST00000462421 MMP16P51512 607 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 RIDAP52758 137 aaKnown RBP7.58□□□□□ -1.2
DDX39B-216ENST00000462421 LCN2P80188 198 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 KRTAP1-1Q07627 177 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 SLC16A9Q7RTY1 509 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 TIGD4Q8IY51 512 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PARP8Q8N3A8 854 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 OR56B2PQ8NGI1 322 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 CENPNQ96H22 339 aaPredicted RBP7.58□□□□□ -1.2
DDX39B-216ENST00000462421 MAP6Q96JE9 813 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 TECTBQ96PL2 329 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 SLC30A2Q9BRI3 323 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 ABHD6Q9BV23 337 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 ADI1Q9BV57 179 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 RTL8AQ9BWD3 113 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 SSBP3Q9BWW4 388 aaPredicted RBP7.58□□□□□ -1.2
DDX39B-216ENST00000462421 SUCNR1Q9BXA5 334 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 YIPF3Q9GZM5 350 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 C7orf69Q9H7B7 122 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 METTL17Q9H7H0 456 aaPredicted RBP7.58□□□□□ -1.2
DDX39B-216ENST00000462421 MED20Q9H944 212 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PLEKHA1Q9HB21 404 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 SLC25A19Q9HC21 320 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 ERVK-18Q9QC07 812 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PPIAL4AQ9Y536 164 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 ACANP16112 2415 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PRR14LQ5THK1 2151 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 NKX6-3A6NJ46 265 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 TMEM178BH3BS89 294 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 NDUFA2O43678 99 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 PLPP2O43688 288 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF254O75437 659 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 CYB5R3P00387 301 aaPredicted RBP7.57□□□□□ -1.2
DDX39B-216ENST00000462421 GRPP07492 148 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 OCM2P0CE71 109 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 OCMP0CE72 109 aaPredicted RBP7.57□□□□□ -1.2
DDX39B-216ENST00000462421 CLUP10909 449 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 THBS2P35442 1172 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF121P58317 390 aaPredicted RBP7.57□□□□□ -1.2
DDX39B-216ENST00000462421 CDK5Q00535 292 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 GLYATL3Q5SZD4 288 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 CD276Q5ZPR3 534 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 PLPP7Q8NBV4 271 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 OR2AE1Q8NHA4 323 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 OTOSQ8NHW6 89 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 RNF133Q8WVZ7 376 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 ITFG2Q969R8 447 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 NEIL1Q96FI4 390 aaPredicted RBP7.57□□□□□ -1.2
DDX39B-216ENST00000462421 NMNAT2Q9BZQ4 307 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 POFUT1Q9H488 388 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 MOB1AQ9H8S9 216 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 GCM1Q9NP62 436 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 UFSP2Q9NUQ7 469 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 RNF7Q9UBF6 113 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 DNAJB11Q9UBS4 358 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 CLN8Q9UBY8 286 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 CACNG2Q9Y698 323 aa7.57□□□□□ -1.2
DDX39B-216ENST00000462421 A0A0A6YYJ9 748 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 IGHV3-64DA0A0J9YX35 117 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 TMEM269A0A1B0GVZ9 245 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 ACOD1A6NK06 481 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 SAC3D1A6NKF1 404 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 FAM157AC9JC47 383 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 TRIM77I1YAP6 450 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 PHF1O43189 567 aaPredicted RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 SELENOFO60613 162 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 IGHV2-70P01814 119 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 HLA-DPB1P04440 258 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 KRT8P05787 483 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 MRPL3P09001 348 aaKnown RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 CD200P41217 278 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 MAP2K3P46734 347 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 NPY4RP50391 375 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 PSMA6P60900 246 aaKnown RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF92Q03936 586 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 PTGES3Q15185 160 aaKnown RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 PCK2Q16822 640 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 MICBQ29980 383 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF181Q2M3W8 571 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 SNAI3Q3KNW1 292 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 NXNL2Q5VZ03 156 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 DEGS2Q6QHC5 323 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 LRRN1Q6UXK5 716 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 DCDC5Q6ZRR9 648 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 COLCA1Q6ZS62 124 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 AMIGO2Q86SJ2 522 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 LRRC28Q86X40 367 aaPredicted RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 ZDHHC23Q8IYP9 409 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 HS3ST5Q8IZT8 346 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF420Q8TAQ5 688 aaPredicted RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 TMEM163Q8TC26 289 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 C1orf159Q96HA4 380 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 SEMA6AQ9H2E6 1030 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms