RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 STX19Q8N4C7 294 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 GTF3AQ92664 365 aaKnown RBP10.07□□□□□ -0.8
CPNE1-221ENST00000462352 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-221ENST00000462352 PELI1Q96FA3 418 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 TRMT61AQ96FX7 289 aaKnown RBP10.07□□□□□ -0.8
CPNE1-221ENST00000462352 PERPQ96FX8 193 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 GSX2Q9BZM3 304 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 MS4A5Q9H3V2 200 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 RGCCQ9H4X1 137 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 ISG20L2Q9H9L3 353 aaKnown RBP10.07□□□□□ -0.8
CPNE1-221ENST00000462352 PAK1IP1Q9NWT1 392 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-221ENST00000462352 UBAP1Q9NZ09 502 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 CGGBP1Q9UFW8 167 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-221ENST00000462352 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 OR52A1Q9UKL2 312 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 TPRKBQ9Y3C4 175 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 SNX5Q9Y5X3 404 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 USF3Q68DE3 2245 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 ARFGEF3Q5TH69 2177 aa10.07□□□□□ -0.8
CPNE1-221ENST00000462352 CCDC168Q8NDH2 2452 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 A0A0U1RQV5 110 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 hCG_38984A0A1B0GV85 526 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 GGT3PA6NGU5 568 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 ZSCAN5BA6NJL1 495 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 CD300LBA8K4G0 201 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 C17orf100A8MU93 164 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 IQCF6A8MYZ5 107 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 LILRA1O75019 489 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 MT-ND5P03915 603 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 CFL1P23528 166 aaKnown RBP10.06□□□□□ -0.8
CPNE1-221ENST00000462352 CRHBPP24387 322 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 C21orf33P30042 268 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-221ENST00000462352 LIPAP38571 399 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 ZNF81P51508 661 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 SLC35A2P78381 396 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 FAM3AP98173 230 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 MED21Q13503 144 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 WDR38Q5JTN6 314 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 RBM48Q5RL73 367 aaKnown RBP10.06□□□□□ -0.8
CPNE1-221ENST00000462352 OR2G6Q5TZ20 316 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 Q6ZR03 302 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 ELMOD2Q8IZ81 293 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 LRRC75A-AS1Q8N1F1 130 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 ZNF786Q8N393 782 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 KLHL36Q8N4N3 616 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 BHLHE23Q8NDY6 225 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 OR8G5Q8NG78 346 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 OR51E1Q8TCB6 317 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 SPRYD4Q8WW59 207 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-221ENST00000462352 SGCDQ92629 289 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 LYZL4Q96KX0 146 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 SORCS2Q96PQ0 1159 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 SOX7Q9BT81 388 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 TPK1Q9H3S4 243 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 MSL2Q9HCI7 577 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 CYSLTR2Q9NS75 346 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 CHCHD3Q9NX63 227 aaKnown RBP10.06□□□□□ -0.8
CPNE1-221ENST00000462352 CLEC2DQ9UHP7 191 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 SLC22A13Q9Y226 551 aa10.06□□□□□ -0.8
CPNE1-221ENST00000462352 CAB39Q9Y376 341 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-221ENST00000462352 IGLV3-1P01715 115 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 IGHV1-46P01743 117 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 IGHV4-39P01824 125 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 CDK1P06493 297 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 HTR1AP08908 422 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 KIR3DL2P43630 455 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 GSK3AP49840 483 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 ATP5J2P56134 94 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 NANOS3P60323 173 aaKnown RBP10.05□□□□□ -0.8
CPNE1-221ENST00000462352 TNK1Q13470 666 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 OR8B8Q15620 311 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 ZMAT1Q5H9K5 638 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 FDX2Q6P4F2 183 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 TMPRSS11AQ6ZMR5 421 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 COMMD2Q86X83 199 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 PRSS35Q8N3Z0 413 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 OR56B2PQ8NGI1 322 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 OR2G2Q8NGZ5 317 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 MYDGFQ969H8 173 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 RAB1BQ9H0U4 201 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 DUSP21Q9H596 190 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 GPR84Q9NQS5 396 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 ERVK-18Q9QC07 812 aa10.05□□□□□ -0.8
CPNE1-221ENST00000462352 TEX15Q9BXT5 2789 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 E9PI62 339 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 P2RY10O00398 339 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 MYL12BO14950 172 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 SPRY3O43610 288 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ERCC1P07992 297 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ADH4P08319 380 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ACKR3P25106 362 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 DDOSTP39656 456 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 MAGEB1P43366 347 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 CCR9P51686 369 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 EFNA4P52798 201 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 GBX2P52951 348 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ART1P52961 327 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 MRPL28Q13084 256 aaKnown RBP10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ALKBH1Q13686 389 aaKnown RBP10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ODF4Q2M2E3 257 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms