RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 SFT2D2O95562 160 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 NUDT14O95848 222 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 MPIG6BO95866 241 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 HLA-DOBP13765 273 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 CSNK1EP49674 416 aaKnown RBP10.42□□□□□ -0.74
CPSF3-202ENST00000460593 TMEM33P57088 247 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 COL19A1Q14993 1142 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 CST6Q15828 149 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 TEX30Q5JUR7 227 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 TMEM31Q5JXX7 168 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 MED25Q71SY5 747 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 TERB2Q8NHR7 220 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 CA5BP1Q8WTZ4 195 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 RARRES2Q99969 163 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 RTBDNQ9BSG5 229 aaPredicted RBP10.42□□□□□ -0.74
CPSF3-202ENST00000460593 HHLA2Q9UM44 414 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 RHBDD3Q9Y3P4 386 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 CFAP54Q96N23 3096 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 EYSQ5T1H1 3165 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 SPAG17Q6Q759 2223 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 RHPN2P1A8MT19 583 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 ST8SIA5O15466 376 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 ZNF708P17019 499 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 ANOS1P23352 680 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 RPL12P30050 165 aaKnown RBP10.42□□□□□ -0.74
CPSF3-202ENST00000460593 SEC13P55735 322 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 C2orf27AQ580R0 203 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 PLAC9Q5JTB6 97 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 AWAT2Q6E213 333 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 SSX9Q7RTT3 188 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 POC1AQ8NBT0 407 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 OR1E3Q8WZA6 343 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 SUCNR1Q9BXA5 334 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 KIR3DX1Q9H7L2 352 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 FAM60AQ9NP50 221 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 TREM2Q9NZC2 230 aa10.42□□□□□ -0.74
CPSF3-202ENST00000460593 TMEM269A0A1B0GVZ9 245 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 H0YIG0 161 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 IL11P20809 199 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 BCKDHBP21953 392 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 EMP2P54851 167 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 RPS23P62266 143 aaKnown RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 CYCSP99999 105 aaKnown RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 GAMTQ14353 236 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 SURF2Q15527 256 aaPredicted RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 WBP2NLQ6ICG8 309 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 DCXRQ7Z4W1 244 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 ANGPTL5Q86XS5 388 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 SCARF2Q96GP6 870 aaPredicted RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 LMF2Q9BU23 707 aaKnown RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 APOOQ9BUR5 198 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 LYRM4Q9HD34 91 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 POLE3Q9NRF9 147 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 FAM86C1Q9NVL1 165 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 OR52A1Q9UKL2 312 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 GPR132Q9UNW8 380 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 SLC17A4Q9Y2C5 497 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 PHYHO14832 338 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 XRCC2O43543 280 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 SLC35E2P0CK97 266 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 SLC2A1P11166 492 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 ZNF10P21506 573 aaPredicted RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 CFPP27918 469 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 PPP1CCP36873 323 aaKnown RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 SNCAP37840 140 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 IAH1Q2TAA2 248 aaPredicted RBP10.41□□□□□ -0.74
CPSF3-202ENST00000460593 Q3ZCU0 254 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 TMEM268Q5VZI3 342 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 NSUN5P2Q63ZY6 315 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 OR9K2Q8NGE7 335 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 OR5D18Q8NGL1 313 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 MR1Q95460 341 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 GPR61Q9BZJ8 451 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 OR11A1Q9GZK7 315 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 PRDM13Q9H4Q3 707 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 PARP11Q9NR21 331 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 DOK5Q9P104 306 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 ZDHHC8Q9ULC8 765 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 CHD9Q3L8U1 2897 aa10.41□□□□□ -0.74
CPSF3-202ENST00000460593 PRSS38A1L453 326 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 K7EPK0 472 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 OR2C1O95371 312 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 PRH1P02810 166 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 SP3Q02447 781 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 FAM71E2Q8N5Q1 922 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 HSD17B11Q8NBQ5 300 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 OR13G1Q8NGZ3 307 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 GPR119Q8TDV5 335 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 C2orf50Q96LR7 162 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 CCDC3Q9BQI4 270 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 G6PC2Q9NQR9 355 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 RAB22AQ9UL26 194 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 IGKV1D-43A0A0B4J1Z2 117 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 PRSS37A4D1T9 235 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 KLK2P20151 261 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 PPM1AP35813 382 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 GABRA4P48169 554 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 ZNF674Q2M3X9 581 aa10.4□□□□□ -0.74
CPSF3-202ENST00000460593 ZNF574Q6ZN55 896 aaPredicted RBP10.4□□□□□ -0.74
CPSF3-202ENST00000460593 TAAR9Q96RI9 348 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms