RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SIGLEC12Q96PQ1 595 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 OR14A2Q96R54 314 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 TBX5Q99593 518 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 CSTL1Q9H114 145 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 ALKBH4Q9NXW9 302 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 GDF2Q9UK05 429 aaPredicted RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 ZNF346Q9UL40 294 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 LSM2Q9Y333 95 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 CFAP47Q6ZTR5 3102 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 LOC400499M0QZD8 3231 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 A0A1W2PNR3 127 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 TMEM129A0AVI4 362 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 H7C1C5 153 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 CCSO14618 274 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 NKX2-8O15522 239 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 PPIHO43447 177 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 NEURL1O76050 574 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 AKR7A3O95154 331 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 TXNDC12O95881 172 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 PNPP00491 289 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 IGHA1P01876 353 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 LIMS3P0CW19 117 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 LIMS4P0CW20 117 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 GDNFP39905 211 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 ALDH3B1P43353 468 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 RPL27P61353 136 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 LSM3P62310 102 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 LCN6P62502 163 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 FABP9Q0Z7S8 132 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 RTP5Q14D33 572 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 OR1C1Q15619 314 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 ACKR1Q16570 336 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 TSTQ16762 297 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 ABLIM2Q6H8Q1 611 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 UNQ6494/PRO21346Q6UXR6 183 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 PEG10Q86TG7 708 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 CCDC190Q86UF4 302 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 PCNPQ8WW12 178 aaKnown RBP9.23□□□□□ -0.93
HERC4-207ENST00000460168 SMPDL3BQ92485 455 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 PIGQQ9BRB3 760 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 NDUFAF3Q9BU61 184 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 CHST11Q9NPF2 352 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 DEPPQ9NTK1 212 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 ERVK13-1Q9NX77 482 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 HAO2Q9NYQ3 351 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 PLA2G3Q9NZ20 509 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 B3GALT5Q9Y2C3 310 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 ZFHX4Q86UP3 3567 aa9.23□□□□□ -0.93
HERC4-207ENST00000460168 DCHS1Q96JQ0 3298 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 MED12Q93074 2177 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 DAPL1A0PJW8 107 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 OR2M5A3KFT3 312 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 ZIC3O60481 467 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 GFRA3O60609 400 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 TRAPPC6AO75865 159 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 RENP00797 406 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 SCG5P05408 212 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 CNR1P21554 472 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 SRD5A2P31213 254 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 ACVR1BP36896 505 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 PRKXP51817 358 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 AP3S2P59780 193 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 SORDQ00796 357 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 SPANXN2Q5MJ10 180 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 TMEM108Q6UXF1 575 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 ARIH2OSQ8N7S6 290 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 OR14L1PQ8NHC6 308 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 TSSK2Q96PF2 358 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 DDOQ99489 341 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 MMP28Q9H239 520 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 SYT4Q9H2B2 425 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 TXNIPQ9H3M7 391 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 RERGLQ9H628 205 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 ADGRL4Q9HBW9 690 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 FOXD3Q9UJU5 478 aaPredicted RBP9.22□□□□□ -0.93
HERC4-207ENST00000460168 BOKQ9UMX3 212 aaPredicted RBP9.22□□□□□ -0.93
HERC4-207ENST00000460168 HDGFL3Q9Y3E1 203 aa9.22□□□□□ -0.93
HERC4-207ENST00000460168 DCDC2BA2VCK2 349 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 LRRC3CA6NJW4 275 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 NPIPA5E9PKD4 350 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 K7EP13 123 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 SULT2B1O00204 365 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 RFPL3SP0C7P2 107 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 HLA-DOBP13765 273 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 ZNF17P17021 662 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 GDF1P27539 372 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 SHC1P29353 583 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 RAP1BP61224 184 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 POU3F1Q03052 451 aaPredicted RBP9.21□□□□□ -0.93
HERC4-207ENST00000460168 MLLT11Q13015 90 aaPredicted RBP9.21□□□□□ -0.93
HERC4-207ENST00000460168 MELKQ14680 651 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 FAHD2BQ6P2I3 314 aaPredicted RBP9.21□□□□□ -0.93
HERC4-207ENST00000460168 PAMR1Q6UXH9 720 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 ZFP82Q8N141 532 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 TMEM99Q8N816 258 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 OR2D3Q8NGH3 330 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 FAHD2AQ96GK7 314 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 CNN2Q99439 309 aaKnown RBP9.21□□□□□ -0.93
HERC4-207ENST00000460168 PRRT1Q99946 306 aa9.21□□□□□ -0.93
HERC4-207ENST00000460168 FAM173AQ9BQD7 235 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms