RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CLVS2Q5SYC1 327 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZBTB37Q5TC79 503 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 SFXN4Q6P4A7 337 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 FIP1L1Q6UN15 594 aaKnown RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 FAM131AQ6UXB0 335 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 UNQ9370/PRO34162Q6UXP9 181 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 MDP1Q86V88 176 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 FJX1Q86VR8 437 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 LRRC28Q86X40 367 aaPredicted RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF101Q8IZC7 436 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 RDH10Q8IZV5 341 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 GABRG1Q8N1C3 465 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PRSS35Q8N3Z0 413 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PARP16Q8N5Y8 322 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 FAM169BQ8N8A8 192 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 GALNT11Q8NCW6 608 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 C19orf18Q8NEA5 215 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR1M1Q8NGA1 313 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR8B12Q8NGG6 310 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR1J1Q8NGS3 322 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 RAB40AQ8WXH6 277 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PIGCQ92535 297 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 HTRA1Q92743 480 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 BORCS5Q969J3 196 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PGLYRP3Q96LB9 341 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 CMTM3Q96MX0 182 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 DERL3Q96Q80 235 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 AMELYQ99218 206 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 SLC30A2Q9BRI3 323 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF649Q9BS31 505 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 URM1Q9BTM9 101 aaKnown RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PAPOLGQ9BWT3 736 aaKnown RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 C1QTNF6Q9BXI9 259 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ACTR6Q9GZN1 396 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 CST11Q9H112 138 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 WNT5BQ9H1J7 359 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 CXorf56Q9H5V9 222 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 G6PC2Q9NQR9 355 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 C14orf119Q9NWQ9 140 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 GHRLQ9UBU3 117 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 STEAP1Q9UHE8 339 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 AK6Q9Y3D8 172 aaKnown RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 FAM215AQ9Y5M1 114 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ETV7Q9Y603 341 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 SIRT4Q9Y6E7 314 aaPredicted RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 APC2O95996 2303 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 SPTBN2O15020 2390 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 A0A0G2JNJ9 132 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 TRBV5-5A0A0J9YX44 114 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 A0A1W2PR80 420 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 ANKRD61A6NGH8 418 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 TUBAL3A6NHL2 446 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 IFITM5A6NNB3 132 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 AIPO00170 330 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNHIT1O43257 154 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 TIMM8AO60220 97 aaPredicted RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNF780AO75290 641 aaPredicted RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 BPNT1O95861 308 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 APOA1P02647 267 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 MMP7P09237 267 aaPredicted RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 TMEM225BP0DP42 221 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 RAC2P15153 192 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 ARSBP15848 533 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 FSTP19883 344 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 COX5AP20674 150 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 TNFSF4P23510 183 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 PTBP1P26599 531 aaKnown RBP eCLIP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 OTX1P32242 354 aaPredicted RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 KIR3DL2P43630 455 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 GSK3AP49840 483 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 RBP2P50120 134 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNF83P51522 516 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 FUT6P51993 359 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 UCP2P55851 309 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 MTCP1P56278 107 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 PPP1CBP62140 327 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 SPOCK1Q08629 439 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 DBPQ10586 325 aaPredicted RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 LSAMPQ13449 338 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 DCTN2Q13561 401 aaKnown RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 RIN1Q13671 783 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 IL18Q14116 193 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 RSU1Q15404 277 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 PYDC2Q56P42 97 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 UBE2NLQ5JXB2 153 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 FOXB2Q5VYV0 432 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 PLCXD3Q63HM9 321 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 AWAT2Q6E213 333 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 RTL6Q6ICC9 239 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 RAB12Q6IQ22 244 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 RGS7BPQ6MZT1 257 aaPredicted RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 SLC22A25Q6T423 547 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 METAP1DQ6UB28 335 aaPredicted RBP5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 TMEM91Q6ZNR0 172 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 LHFPL2Q6ZUX7 228 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 MOB3CQ70IA8 216 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 LINGO2Q7L985 606 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 MKXQ8IYA7 352 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 OR8H2Q8N162 312 aa5.08□□□□□ -1.6
RNU1-88P-201ENST00000459274 SAMD12Q8N8I0 201 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms