RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PRRG2O14669 202 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 SYNGR3O43761 229 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 IGHV3-9P01782 118 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 ACSM4P0C7M7 580 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 BMP4P12644 408 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 CCL1P22362 96 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 APEX1P27695 318 aaKnown RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 GNALP38405 381 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 GSK3AP49840 483 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 PPP5CP53041 499 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 UBE2NP61088 152 aaKnown RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 GUSBP1Q15486 140 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 CEP78Q5JTW2 689 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 C1QTNF12Q5T7M4 302 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 GLT8D1Q68CQ7 371 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 TFAP2EQ6VUC0 442 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 STAC2Q6ZMT1 411 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 Q6ZT83 130 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 FAM57BQ71RH2 274 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 PGAP1Q75T13 922 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 LINGO2Q7L985 606 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 LRRC28Q86X40 367 aaPredicted RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 SERPINA12Q8IW75 414 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 MFSD4AQ8N468 514 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 ZNF433Q8N7K0 673 aaPredicted RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 CNEP1R1Q8N9A8 125 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 OR8B12Q8NGG6 310 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 OR5D14Q8NGL3 314 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 OR1K1Q8NGR3 316 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 ZNF671Q8TAW3 534 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 FAM57AQ8TBR7 257 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 ASB5Q8WWX0 329 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 FOXRED1Q96CU9 486 aaPredicted RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 C10orf35Q96D05 121 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 CCDC32Q9BV29 185 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 TP63Q9H3D4 680 aaPredicted RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 SLC17A5Q9NRA2 495 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 COMMD3Q9UBI1 195 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 DAPK2Q9UIK4 370 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 PROCRQ9UNN8 238 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 ETV7Q9Y603 341 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 DCHS2Q6V1P9 2916 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 ANKHD1Q8IWZ3 2542 aaKnown RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 PKDREJQ9NTG1 2253 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 A0A1W2PPK0 400 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 SHISA3A0PJX4 238 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 SMIM30A4D0T7 59 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 IFITM5A6NNB3 132 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 FAM25AB3EWG3 89 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 FAM25CB3EWG5 89 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 FAM25GB3EWG6 89 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 PIN1P1O15428 100 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 MAGEB3O15480 346 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 TBX1O43435 398 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 XRCC2O43543 280 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 NCR1O76036 304 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 MMP7P09237 267 aaPredicted RBP7.8□□□□□ -1.16
VPS50-207ENST00000458530 TMIGD3P0DMS9 266 aaPredicted RBP7.8□□□□□ -1.16
VPS50-207ENST00000458530 CALCBP10092 127 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 EPXP11678 715 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 CRYGSP22914 178 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 CFPP27918 469 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 TNFSF8P32971 234 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 TIMP3P35625 211 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 PSG4Q00888 419 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 ZNF181Q2M3W8 571 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 PABPC1L2AQ5JQF8 200 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 ZNF324BQ6AW86 544 aaPredicted RBP7.8□□□□□ -1.16
VPS50-207ENST00000458530 ZNF774Q6NX45 483 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 BEND4Q6ZU67 534 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 CCDC190Q86UF4 302 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 CD163Q86VB7 1156 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 LAX1Q8IWV1 398 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 SKA3Q8IX90 412 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 GCNT2Q8N0V5 402 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 C17orf78Q8N4C9 275 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 PARP16Q8N5Y8 322 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 C9orf106Q8NAJ2 232 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 PLPP7Q8NBV4 271 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 TRMT10AQ8TBZ6 339 aaKnown RBP7.8□□□□□ -1.16
VPS50-207ENST00000458530 AKAP1Q92667 903 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS50-207ENST00000458530 HTRA1Q92743 480 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 CPNE2Q96FN4 548 aaPredicted RBP7.8□□□□□ -1.16
VPS50-207ENST00000458530 DIRAS2Q96HU8 199 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 WNT5BQ9H1J7 359 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 PPIL3Q9H2H8 161 aaKnown RBP7.8□□□□□ -1.16
VPS50-207ENST00000458530 ZCCHC4Q9H5U6 513 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 OPA3Q9H6K4 179 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 ABCB9Q9NP78 766 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 OBP2BQ9NPH6 170 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 ZNF275Q9NSD4 429 aaPredicted RBP7.8□□□□□ -1.16
VPS50-207ENST00000458530 ASF1BQ9NVP2 202 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 PRSS50Q9UI38 385 aa7.8□□□□□ -1.16
VPS50-207ENST00000458530 A0A0G2JK05 382 aa7.79□□□□□ -1.16
VPS50-207ENST00000458530 LOC390937A0A1W2PQ73 354 aa7.79□□□□□ -1.16
VPS50-207ENST00000458530 CIB4A0PJX0 185 aa7.79□□□□□ -1.16
VPS50-207ENST00000458530 ISPDA4D126 451 aa7.79□□□□□ -1.16
VPS50-207ENST00000458530 VGLL3A8MV65 326 aa7.79□□□□□ -1.16
VPS50-207ENST00000458530 J3QW42 95 aa7.79□□□□□ -1.16
VPS50-207ENST00000458530 CTDSP2O14595 271 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms