RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 OPN4Q9UHM6 478 aa14.69□□□□□ -0.06
CCDC43-202ENST00000457422 PCSK5Q92824 1860 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 NCKAP5O14513 1909 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 A0A0U1RQV5 110 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 C5orf63A6NC05 138 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 H3BUI4 141 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 SMAD9O15198 467 aaKnown RBP14.68□□□□□ -0.06
CCDC43-202ENST00000457422 SLC22A5O76082 557 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 RGS11O94810 467 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 MPC2O95563 127 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 CHRM2P08172 466 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 SSTR2P30874 369 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 Q6ZSR3 168 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 YRDCQ86U90 279 aaKnown RBP14.68□□□□□ -0.06
CCDC43-202ENST00000457422 BPIFB2Q8N4F0 458 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 ESX1Q8N693 406 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 OR10R2Q8NGX6 335 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 STRADBQ9C0K7 418 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 CHST6Q9GZX3 395 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 POFUT1Q9H488 388 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 MRPS28Q9Y2Q9 187 aaKnown RBP14.68□□□□□ -0.06
CCDC43-202ENST00000457422 FLVCR1Q9Y5Y0 555 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 WDFY4Q6ZS81 3184 aa14.68□□□□□ -0.06
CCDC43-202ENST00000457422 DISC1C4P0D8 188 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 E9PLN8 166 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 SERPINA7P05543 415 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 C4BPBP20851 252 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 H2BFSP57053 126 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 ZNF528Q3MIS6 628 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 GLIPR1L1Q6UWM5 242 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 CHMP1BQ7LBR1 199 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 TRAPPC6BQ86SZ2 158 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 CHST4Q8NCG5 386 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 WDR89Q96FK6 387 aaPredicted RBP14.67□□□□□ -0.06
CCDC43-202ENST00000457422 PGAM5Q96HS1 289 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 TAAR9Q96RI9 348 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 DDA1Q9BW61 102 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 ULBP2Q9BZM5 246 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 SPRY4Q9C004 299 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 LPAR5Q9H1C0 372 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 FARSAQ9Y285 508 aaKnown RBP14.67□□□□□ -0.06
CCDC43-202ENST00000457422 OR14I1A6ND48 311 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 OR5H15A6NDH6 313 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 LRRC3CA6NJW4 275 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 OR4E1P0C645 316 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 PRF1P14222 555 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 ZNF84P51523 738 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 UBE2MP61081 183 aaKnown RBP14.67□□□□□ -0.06
CCDC43-202ENST00000457422 MRPS34P82930 218 aaKnown RBP14.67□□□□□ -0.06
CCDC43-202ENST00000457422 C2orf68Q2NKX9 166 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 C4orf46Q504U0 113 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 RAB11FIP2Q7L804 512 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 GGNQ86UU5 652 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 ZNF101Q8IZC7 436 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 OR13C8Q8NGS7 320 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 KCNG3Q8TAE7 436 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 TNFAIP8L1Q8WVP5 186 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 SLC6A7Q99884 636 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 PRRT1Q99946 306 aa14.67□□□□□ -0.06
CCDC43-202ENST00000457422 MRPS18CQ9Y3D5 142 aaKnown RBP14.67□□□□□ -0.06
CCDC43-202ENST00000457422 IFNA7P01567 189 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 APOC1P02654 83 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 UBBP0CG47 229 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 TBPP20226 339 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 GRK1Q15835 563 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 FAM189A2Q15884 450 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 RSPO1Q2MKA7 263 aaPredicted RBP14.66□□□□□ -0.06
CCDC43-202ENST00000457422 RNASE10Q5GAN6 216 aaKnown RBP14.66□□□□□ -0.06
CCDC43-202ENST00000457422 ACER2Q5QJU3 275 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 ATPAF1Q5TC12 328 aaPredicted RBP14.66□□□□□ -0.06
CCDC43-202ENST00000457422 FAM27BQ5VT28 67 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 LRRC18Q8N456 261 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 CCDC54Q8NEL0 328 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 OR14L1PQ8NHC6 308 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 LYZL4Q96KX0 146 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 DPCDQ9BVM2 203 aaPredicted RBP14.66□□□□□ -0.06
CCDC43-202ENST00000457422 RBM24Q9BX46 236 aaKnown RBP14.66□□□□□ -0.06
CCDC43-202ENST00000457422 V9GYS6 101 aa14.66□□□□□ -0.06
CCDC43-202ENST00000457422 IGKV1-9A0A0C4DH69 117 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 HMSDA8MTL9 139 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 F5H5P2 479 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 CDC14BO60729 498 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 HCKP08631 526 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 RFPL3SP0C7P2 107 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 SP9P0CG40 484 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 THBS4P35443 961 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 CASRP41180 1078 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 OR3A4PP47883 348 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 ECH1Q13011 328 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 RTN4RL2Q86UN3 420 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 NAA40Q86UY6 237 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 OR4S1Q8NGB4 309 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 NUDCD2Q8WVJ2 157 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 SLC39A7Q92504 469 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 ADGRG7Q96K78 797 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 IRF2BPLQ9H1B7 796 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 ANAPC10Q9UM13 185 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 A0A0A6YYD4 124 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 LNP1A1A4G5 178 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 LINC00862A6NCI5 91 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms