RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	CDH10	Q9Y6N8	788 aa		10.92	□□□□□ -0.66
SNHG17-208	ENST00000456953	IGHV1-69D	A0A0B4J2H0	117 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	ZNF879	B4DU55	563 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	C22orf46	C9J442	243 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	SOCS2	O14508	198 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	TSPAN9	O75954	239 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	TOX4	O94842	621 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	SOX14	O95416	240 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	IGHV1-69	P01742	117 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	F13B	P05160	661 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	LIPF	P07098	398 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	CST2	P09228	141 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	VSIG8	P0DPA2	414 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	NR2C1	P13056	603 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	OSM	P13725	252 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	MMP9	P14780	707 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	POU1F1	P28069	291 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	SLC6A6	P31641	620 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	ALDH3A2	P51648	485 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	EGR3	Q06889	387 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	ZNF181	Q2M3W8	571 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	CD300LD	Q6UXZ3	194 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	DCDC5	Q6ZRR9	648 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	RASSF6	Q6ZTQ3	369 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	C1orf87	Q8N0U7	546 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	GALNT4	Q8N4A0	578 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	MOSPD2	Q8NHP6	518 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	TEX47	Q8TBZ9	253 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	NSMAF	Q92636	917 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	CMBL	Q96DG6	245 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	MEGF10	Q96KG7	1140 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	TBX15	Q96SF7	602 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	VCX3B	Q9H321	246 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	POFUT1	Q9H488	388 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	INIP	Q9NRY2	104 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	TBC1D23	Q9NUY8	699 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	NECAP2	Q9NVZ3	263 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	ENOPH1	Q9UHY7	261 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	SIGLEC7	Q9Y286	467 aa		10.91	□□□□□ -0.66
SNHG17-208	ENST00000456953	IGKV1D-43	A0A0B4J1Z2	117 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	CASQ2	O14958	399 aa	Predicted RBP	10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	GPR37	O15354	613 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	MITF	O75030	526 aa	Predicted RBP	10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	PTP4A3	O75365	173 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	ALPL	P05186	524 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	LAP3	P28838	519 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	SRP9	P49458	86 aa	Known RBP	10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	NPY4R	P50391	375 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	RAD23A	P54725	363 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	CTXN1	P60606	82 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	FMOD	Q06828	376 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	CD47	Q08722	323 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	TOP3A	Q13472	1001 aa	Predicted RBP	10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	RFX4	Q33E94	735 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	SLC36A3	Q495N2	470 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	CLEC12A	Q5QGZ9	265 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	ARMC4	Q5T2S8	1044 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	CD276	Q5ZPR3	534 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	KDM4D	Q6B0I6	523 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	ZNF841	Q6ZN19	808 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953		Q6ZTK2	550 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	IGFN1	Q86VF2	1251 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	CLDN22	Q8N7P3	220 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	COG8	Q96MW5	612 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	WDFY2	Q96P53	400 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	SLC29A1	Q99808	456 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	IFT27	Q9BW83	186 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	OR52D1	Q9H346	318 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	RIBC2	Q9H4K1	309 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	EGLN3	Q9H6Z9	239 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953	USE1	Q9NZ43	259 aa		10.9	□□□□□ -0.66
SNHG17-208	ENST00000456953		A0A0U1RQK1	487 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	NPIPB13	A6NJU9	1138 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	NPIPB4	C9JG80	1138 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	COX5B	P10606	129 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	ZNF26	P17031	533 aa	Predicted RBP	10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	GUCA1A	P43080	201 aa	Predicted RBP	10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	FHL1	Q13642	323 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	HERPUD1	Q15011	391 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	METTL11B	Q5VVY1	283 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	SLC25A47	Q6Q0C1	308 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	DPY19L2P2	Q6ZN68	376 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	SYT9	Q86SS6	491 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	MOGAT3	Q86VF5	341 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	PACRGL	Q8N7B6	248 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	OR10AD1	Q8NGE0	317 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	OR13G1	Q8NGZ3	307 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	PTP4A1	Q93096	173 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	TSSK6	Q9BXA6	273 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	TEX12	Q9BXU0	123 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	RASSF4	Q9H2L5	321 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	IL20	Q9NYY1	176 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	GRHPR	Q9UBQ7	328 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	STARD10	Q9Y365	291 aa		10.89	□□□□□ -0.67
SNHG17-208	ENST00000456953	BTBD17	A6NE02	478 aa		10.88	□□□□□ -0.67
SNHG17-208	ENST00000456953	C12orf71	A8MTZ7	269 aa		10.88	□□□□□ -0.67

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