RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 UBE2FQ969M7 185 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 RCN3Q96D15 328 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 NMNAT3Q96T66 252 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 ADAT1Q9BUB4 502 aaKnown RBP9.78□□□□□ -0.84
LMCD1-206ENST00000456506 SEMA6AQ9H2E6 1030 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 MMADHCQ9H3L0 296 aaPredicted RBP9.78□□□□□ -0.84
LMCD1-206ENST00000456506 FN3KRPQ9HA64 309 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 TCF7L1Q9HCS4 588 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
LMCD1-206ENST00000456506 GID8Q9NWU2 228 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 ZNRD1Q9P1U0 126 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 RPUSD1Q9UJJ7 312 aaKnown RBP9.78□□□□□ -0.84
LMCD1-206ENST00000456506 POLR1DQ9Y2S0 133 aa9.78□□□□□ -0.84
LMCD1-206ENST00000456506 TRAV38-1A0A0B4J264 116 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 OR6C68A6NDL8 312 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 DVL1O14640 695 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 NDUFA2O43678 99 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 ATP5HO75947 161 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 GYPAP02724 150 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 LCATP04180 440 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 H1F0P07305 194 aaKnown RBP9.77□□□□□ -0.85
LMCD1-206ENST00000456506 HIST1H1CP16403 213 aaKnown RBP9.77□□□□□ -0.85
LMCD1-206ENST00000456506 AMY2BP19961 511 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 PRDX6P30041 224 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 RPS6KA3P51812 740 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 SF3A3Q12874 501 aaKnown RBP eCLIP9.77□□□□□ -0.85
LMCD1-206ENST00000456506 ECH1Q13011 328 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 MAPRE2Q15555 327 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 KCNJ8Q15842 424 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 CDONQ4KMG0 1287 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 DNM1P34Q6PK57 102 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 SMARCD3Q6STE5 483 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 VMO1Q7Z5L0 202 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 Q8N7P7 452 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 OR2AE1Q8NHA4 323 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 ZNRF4Q8WWF5 429 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 DDOQ99489 341 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 SLC22A4Q9H015 551 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 FN3KQ9H479 309 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 C1orf123Q9NWV4 160 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 ADA2Q9NZK5 511 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 VPREB3Q9UKI3 123 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 KPTNQ9Y664 436 aa9.77□□□□□ -0.85
LMCD1-206ENST00000456506 UNC119BA6NIH7 251 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 G3V4G9 280 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 RNASEK-C17orf49H0YIS7 233 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 M0R135 149 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 ECDO95905 644 aaPredicted RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 T-ENOLP0DO92 83 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 GSK3BP49841 420 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 DLX1P56177 255 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 POU4F2Q12837 409 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 RFX4Q33E94 735 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 GLYATL3Q5SZD4 288 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 SAMD5Q5TGI4 173 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 GDPGP1Q6ZNW5 385 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 MRPL21Q7Z2W9 205 aaKnown RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 PDZD9Q8IXQ8 264 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 FAM86B1Q8N7N1 296 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 BOLLQ8N9W6 283 aaKnown RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 FAM110DQ8TAY7 271 aaPredicted RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 SPRYD4Q8WW59 207 aaPredicted RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 TNFRSF14Q92956 283 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 ZNF799Q96GE5 643 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 ERMAPQ96PL5 475 aaPredicted RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 PITX2Q99697 317 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 NDEL1Q9GZM8 345 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 TRIM36Q9NQ86 728 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 RPRD1BQ9NQG5 326 aaKnown RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 MRPL15Q9P015 296 aaKnown RBP9.76□□□□□ -0.85
LMCD1-206ENST00000456506 KIF17Q9P2E2 1029 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 AP3M1Q9Y2T2 418 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 DNAH9Q9NYC9 4486 aa9.76□□□□□ -0.85
LMCD1-206ENST00000456506 IGHV3OR15-7A0A075B7D8 119 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 ZNF816-ZNF321PA0A0X1KG74 233 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 A0A1B0GVI7 797 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 DIRAS1O95057 198 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 SEMG1P04279 462 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 NCK1P16333 377 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 RHCEP18577 417 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 RPS27P42677 84 aaKnown RBP9.75□□□□□ -0.85
LMCD1-206ENST00000456506 CENPAP49450 140 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 SLC7A2P52569 658 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 TPTEP56180 551 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 PRB3Q04118 309 aaPredicted RBP9.75□□□□□ -0.85
LMCD1-206ENST00000456506 MALLQ13021 153 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 OR8B8Q15620 311 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 PCK2Q16822 640 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 C2orf68Q2NKX9 166 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 Q6ZPA2 131 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 CCDC121Q6ZUS5 278 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 FKBP9P1Q75LS8 142 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 RRM2BQ7LG56 351 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 ARPINQ7Z6K5 226 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 CYP4Z1Q86W10 505 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 SCCPDHQ8NBX0 429 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 OR4K13Q8NH42 304 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 SPSB4Q96A44 273 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 AJUBAQ96IF1 538 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 DMRTB1Q96MA1 342 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms