RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TIGD6Q17RP2 521 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 MSMPQ1L6U9 139 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 SPATA46Q5T0L3 261 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF787Q6DD87 383 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 VHLLQ6RSH7 139 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 Q6ZSR3 168 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 PGAP1Q75T13 922 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 TMEM200AQ86VY9 491 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 REEP6Q96HR9 211 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 ISYNA1Q9NPH2 558 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 PTTG3PQ9NZH4 202 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 ST6GALNAC2Q9UJ37 374 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 N6AMT1Q9Y5N5 214 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 LRBAP50851 2863 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 A0A087WXM4 84 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 LOC390937A0A1W2PQ73 354 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 TMEM212A6NML5 194 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 OR4C45A6NMZ5 311 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 B9A039 149 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 CD1AP06126 327 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 ATP6V1B1P15313 513 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 PCMT1P22061 227 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 CCL1P22362 96 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 DDOSTP39656 456 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 KIR3DL2P43630 455 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 GTF2A1P52655 376 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 CDH15P55291 814 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 KLF3P57682 345 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 FAM3AP98173 230 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 PSG7Q13046 419 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 HLXQ14774 488 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 CDK5R1Q15078 307 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 MED22Q15528 200 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 MOGQ16653 247 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 HIST2H2BCQ6DN03 193 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 XAF1Q6GPH4 301 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 C20orf204Q6ZNR8 217 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 MRPL21Q7Z2W9 205 aaKnown RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 DTX2Q86UW9 622 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 MUC15Q8N387 334 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 CCDC54Q8NEL0 328 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 TSPAN14Q8NG11 270 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 OR2AE1Q8NHA4 323 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 FCGR1BQ92637 280 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 PPP1R14AQ96A00 147 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 CMBLQ96DG6 245 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 SMIM19Q96E16 107 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 OR5M11Q96RB7 305 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 MRPL37Q9BZE1 423 aaKnown RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 PLK3Q9H4B4 646 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 CGGBP1Q9UFW8 167 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 FBXO9Q9UK97 447 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 GTF2A1LQ9UNN4 478 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 SLC22A13Q9Y226 551 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 FBN2P35556 2912 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 TRBV2A0A0J9YWF9 115 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 hCG_38984A0A1B0GV85 526 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 TRIM64CA6NLI5 447 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 DHRS7CA6NNS2 312 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 PLPP2O43688 288 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 ZFPL1O95159 310 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 SELEP16581 610 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 LIPAP38571 399 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 MPV17P39210 176 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 MAP2K4P45985 399 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 MLLT11Q13015 90 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-204ENST00000452182 GPR50Q13585 617 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 DOC2BQ14184 412 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 OR8B8Q15620 311 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 MST1LQ2TV78 715 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 TMEM244Q5VVB8 128 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 UBE2UQ5VVX9 321 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 AGAP6Q5VW22 663 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 DMKNQ6E0U4 476 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF367Q7RTV3 350 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 FBXL14Q8N1E6 418 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 OR51E1Q8TCB6 317 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 LYZL4Q96KX0 146 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 UBTD1Q9HAC8 227 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 GPR84Q9NQS5 396 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 DUSP13Q9UII6 198 aa9.92□□□□□ -0.82
SCN9A-204ENST00000452182 A0A1B0GTI1 187 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 IQCF6A8MYZ5 107 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 LILRA1O75019 489 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 MTRF1O75570 445 aaKnown RBP9.91□□□□□ -0.82
SCN9A-204ENST00000452182 CLPTM1O96005 669 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 GSK3AP49840 483 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 TPBGQ13641 420 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 TMEM255AQ5JRV8 349 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 DOK3Q7L591 496 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 KRT74Q7RTS7 529 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 LRP11Q86VZ4 500 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 OR5AK2Q8NH90 309 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 IGFBPL1Q8WX77 278 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 MGLLQ99685 303 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 COMMD4Q9H0A8 199 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 CBLN4Q9NTU7 201 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 GPR160Q9UJ42 338 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms