RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 TMEM230Q96A57 120 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 ALKBH3Q96Q83 286 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 TRBV5-4A0A0C4DH59 114 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 ETHE1O95571 254 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 DTYMKP23919 212 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 GPM6AP51674 278 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 EXOSC2Q13868 293 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 NDFIP1Q9BT67 221 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SOX7Q9BT81 388 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 FBXL4Q9UKA2 621 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SLC17A1Q14916 467 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 COL13A1Q5TAT6 717 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SLC25A26Q70HW3 274 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 PLA2G12AQ9BZM1 189 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 A0A0A6YYD5 115 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SDCBPO00560 298 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 IAPPP10997 89 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 MEOX2P50222 304 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 TAS2R45P59539 299 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 OR13C5Q8NGS8 318 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 PARP12Q9H0J9 701 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SLC25A37Q9NYZ2 338 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SLC22A13Q9Y226 551 aa12.64□□□□□ -0.39
RAPGEF3-205ENST00000449771 SOX18P35713 384 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 BPIFB3P59826 476 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 FAM26EQ8N5C1 309 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 OR2Z1Q8NG97 314 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 APH1BQ8WW43 257 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 ZNF629Q9UEG4 869 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 TRGV10A0A0A0MS01 117 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 TAF9Q16594 264 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 C20orf24Q9BUV8 137 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 P4HTMQ9NXG6 502 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 CSAG2Q9Y5P2 127 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 SPRY1O43609 319 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 HNF1AP20823 631 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 GSG1Q2KHT4 349 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 TP53I13Q8NBR0 393 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 MYO10Q9HD67 2058 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 KLK8O60259 260 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 TGM1P22735 817 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 METAP1P53582 386 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 AGERQ15109 404 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 TRIP6Q15654 476 aaKnown RBP12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 FAM209AQ5JX71 171 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 ANKRD34AQ69YU3 496 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 OR10R2Q8NGX6 335 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 SIGLEC11Q96RL6 698 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 FOXB1Q99853 325 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 GABARAPL1Q9H0R8 117 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 SLCO1C1Q9NYB5 712 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 ZNF83P51522 516 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 IL11RAQ14626 422 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 PAQR6Q6TCH4 344 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 OR10P1Q8NGE3 313 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 BCL2L10Q9HD36 194 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 FBXO8Q9NRD0 319 aa12.63□□□□□ -0.39
RAPGEF3-205ENST00000449771 XRCC3O43542 346 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 FCGR2CP31995 323 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 BTG1P62324 171 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 TMEM268Q5VZI3 342 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 ZNF680Q8NEM1 530 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 NDUFB11Q9NX14 153 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 AK3Q9UIJ7 227 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 ING1Q9UK53 422 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 ST3GAL6Q9Y274 331 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 HMX2A2RU54 273 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 TRIM77I1YAP6 450 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 TNFRSF1AP19438 455 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 CXorf67Q86X51 503 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 OSR2Q8N2R0 312 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 GABARAPL3Q9BY60 117 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 LINC01387J3KSC0 135 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 PTBP1P26599 531 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 C17orf78Q8N4C9 275 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 HSPB2A8KAH6 182 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 HSPB2Q16082 182 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 ZNF561Q8N587 486 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 APOBEC3DQ96AK3 386 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 C12orf10Q9HB07 376 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 FZR1Q9UM11 496 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 MBTPS2O43462 519 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 KIRREL2Q6UWL6 708 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 OR4D10Q8NGI6 311 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 OR1L3Q8NH93 324 aa12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 ADAT1Q9BUB4 502 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-205ENST00000449771 PPM1DO15297 605 aa12.61□□□□□ -0.39
RAPGEF3-205ENST00000449771 KCNRGQ8N5I3 272 aa12.61□□□□□ -0.39
RAPGEF3-205ENST00000449771 RPP25Q9BUL9 199 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-205ENST00000449771 TOLLIPQ9H0E2 274 aa12.61□□□□□ -0.39
RAPGEF3-205ENST00000449771 GAB2Q9UQC2 676 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms