RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 GCH1P30793 250 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 THBS4P35443 961 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 LIPAP38571 399 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 HLXQ14774 488 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-210ENST00000449116 SSX1Q16384 188 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 ZNF718Q3SXZ3 478 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 ZNF672Q499Z4 452 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-210ENST00000449116 YIF1BQ5BJH7 314 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 MBNL2Q5VZF2 373 aaKnown RBP12.58□□□□□ -0.4
SHANK2-210ENST00000449116 FBXW12Q6X9E4 464 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 PGAP1Q75T13 922 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 DOK3Q7L591 496 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 PHC2Q8IXK0 858 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 RDH10Q8IZV5 341 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 CCDC54Q8NEL0 328 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 KLF14Q8TD94 323 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-210ENST00000449116 LYZL4Q96KX0 146 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 REPIN1Q9BWE0 567 aaKnown RBP12.58□□□□□ -0.4
SHANK2-210ENST00000449116 HHLA2Q9UM44 414 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 COL12A1Q99715 3063 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 TENM4Q6N022 2769 aa12.58□□□□□ -0.4
SHANK2-210ENST00000449116 FAM221AA4D161 298 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 VSTM5A8MXK1 200 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 E7EQL1 145 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 MTRF1O75570 445 aaKnown RBP12.57□□□□□ -0.4
SHANK2-210ENST00000449116 DHRS3O75911 302 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 RAC2P15153 192 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 ZNF12P17014 697 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 ALDH3B2P48448 385 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 FAM3AP98173 230 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 MS4A15Q8N5U1 240 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-210ENST00000449116 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-210ENST00000449116 NEUROG1Q92886 237 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 ITFG2Q969R8 447 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 CMBLQ96DG6 245 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 FAM71F1Q96KD3 344 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-210ENST00000449116 SOX7Q9BT81 388 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 NDUFB11Q9NX14 153 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 CISD1Q9NZ45 108 aaKnown RBP12.57□□□□□ -0.4
SHANK2-210ENST00000449116 PLEKHB1Q9UF11 243 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-210ENST00000449116 CMAHPQ9Y471 501 aa12.57□□□□□ -0.4
SHANK2-210ENST00000449116 LOC390937A0A1W2PQ73 354 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 GGT3PA6NGU5 568 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 H3BSH0 61 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 ZNF250P15622 560 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 SELEP16581 610 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 PSMA1P25786 263 aaKnown RBP12.56□□□□□ -0.4
SHANK2-210ENST00000449116 GABRA5P31644 462 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 MPV17P39210 176 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 RPL5P46777 297 aaKnown RBP12.56□□□□□ -0.4
SHANK2-210ENST00000449116 GSK3AP49840 483 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 FABP6P51161 128 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
SHANK2-210ENST00000449116 PSG7Q13046 419 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 OR8B8Q15620 311 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 TRAM1Q15629 374 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 MSMPQ1L6U9 139 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 Q6ZSR3 168 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 OR51A4Q8NGJ6 313 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 OR14K1Q8NGZ2 314 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 OR10AC1Q8NH08 325 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 SYNPRQ8TBG9 265 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 GPR148Q8TDV2 347 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 MRPL24Q96A35 216 aaKnown RBP12.56□□□□□ -0.4
SHANK2-210ENST00000449116 HAVCR1Q96D42 359 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 TMED9Q9BVK6 235 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 FZR1Q9UM11 496 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 SF3B6Q9Y3B4 125 aaKnown RBP12.56□□□□□ -0.4
SHANK2-210ENST00000449116 V9GYS6 101 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 ICE1Q9Y2F5 2266 aa12.56□□□□□ -0.4
SHANK2-210ENST00000449116 USP9YO00507 2555 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-210ENST00000449116 FLNBO75369 2602 aaKnown RBP12.55□□□□□ -0.4
SHANK2-210ENST00000449116 DHRS7CA6NNS2 312 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 CTAG2O75638 210 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 SERPINA3P01011 423 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 OR4A8P0C604 315 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 OCM2P0CE71 109 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 KITLGP21583 273 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 COL8A1P27658 744 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 APOBEC3AP31941 199 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-210ENST00000449116 MAP2K3P46734 347 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 PRSS12P56730 875 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 SELENOVP59797 346 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 RPS11P62280 158 aaKnown RBP eCLIP12.55□□□□□ -0.4
SHANK2-210ENST00000449116 ADIPOQQ15848 244 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 Q499Y3 187 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 OR2T2Q6IF00 324 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 SEMA6DQ8NFY4 1073 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 OR56B2PQ8NGI1 322 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 OR13F1Q8NGS4 319 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 OR13C5Q8NGS8 318 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 TSEN15Q8WW01 171 aaKnown RBP12.55□□□□□ -0.4
SHANK2-210ENST00000449116 TMEM203Q969S6 136 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 DHRS9Q9BPW9 319 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 PLK3Q9H4B4 646 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
SHANK2-210ENST00000449116 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
SHANK2-210ENST00000449116 DHDHQ9UQ10 334 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms