RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ING1Q9UK53 422 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 B9D1Q9UPM9 204 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 MEIKINA0A087WXM9 373 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 NRG2O14511 850 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ICOSLGO75144 302 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 IAPPP10997 89 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ATF1P18846 271 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 MPGP29372 298 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 AVPR2P30518 371 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CSN1S1P47710 185 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 VEGFBP49765 207 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 PCBP4P57723 403 aaKnown RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF574Q6ZN55 896 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 RTN4RL1Q86UN2 441 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 LSRQ86X29 649 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 OR5AS1Q8N127 324 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SCCPDHQ8NBX0 429 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 OR2A1Q8NGT9 310 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 AKR1E2Q96JD6 320 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 OXGR1Q96P68 337 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 C12orf49Q9H741 205 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ZDHHC11Q9H8X9 412 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ANKRD10Q9NXR5 420 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 PSENENQ9NZ42 101 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 A4GNTQ9UNA3 340 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 A0A1W2PPH5 198 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF320A2RRD8 509 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 POM121BA6NF01 834 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 H0YIG0 161 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 GPR12P47775 334 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 PNLIPRP2P54317 469 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 LGALS4P56470 323 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SUMO1P63165 101 aaKnown RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 GUCA2AQ02747 115 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CLN3Q13286 438 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 PLA1AQ53H76 456 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 TRIM61Q5EBN2 209 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 RSPO2Q6UXX9 243 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 MAMSTRQ6ZN01 415 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 GPR32P1Q8NGA4 272 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 FAM173AQ9BQD7 235 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 DECR2Q9NUI1 292 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 FOXJ3Q9UPW0 622 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 OR7C2O60412 319 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CNIH1O95406 144 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 RAB5AP20339 215 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 RANP62826 216 aaKnown RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 BTG2P78543 158 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 RUNX2Q13950 521 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 FXNQ16595 210 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 OR2B11Q5JQS5 317 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 PLAC9Q5JTB6 97 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 MORN4Q8NDC4 146 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 FAM103A1Q9BTL3 118 aaKnown RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 SLC17A4Q9Y2C5 497 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 ASPDHA6ND91 283 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 NDUFB7P17568 137 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 FCER1GP30273 86 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CLEC12BQ2HXU8 276 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF628Q5EBL2 1059 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 YRDCQ86U90 279 aaKnown RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 ZDHHC22Q8N966 263 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 OR8D4Q8NGM9 314 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 WBP2Q969T9 261 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 MVB12AQ96EY5 273 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CXorf58Q96LI9 332 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 LINC00615Q96LM1 132 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 OR8B4Q96RC9 309 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CRLF2Q9HC73 371 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 KIAA0100Q14667 2235 aaKnown RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 H0Y8X5 98 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 SIRPB1O00241 398 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 ARPC3O15145 178 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CST4P01036 141 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 SFTA3P0C7M3 94 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 SLC25A4P12235 298 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CALCRP30988 508 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CRYBB2P43320 205 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 EMDP50402 254 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 MLF1P58340 268 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 PJVKQ0ZLH3 352 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 MRPL58Q14197 206 aaKnown RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 HES1Q14469 280 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 TOMM34Q15785 309 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 GUK1Q16774 197 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF528Q3MIS6 628 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 VWA2Q5GFL6 755 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 SLC25A26Q70HW3 274 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 PATE1Q8WXA2 126 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 ASB16Q96NS5 453 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 PRRX2Q99811 253 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 NMES1Q9C002 83 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 TINAGL1Q9GZM7 467 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 SLC17A5Q9NRA2 495 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 SLC6A13Q9NSD5 602 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 ST3GAL6Q9Y274 331 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 TPRP12270 2363 aaKnown RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 PRRT4C9JH25 899 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms