RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MTSS1LQ765P7 747 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF101Q8IZC7 436 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 DTWD2Q8NBA8 298 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 SCGB3A2Q96PL1 93 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 OBP2AQ9NY56 170 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 PUS1Q9Y606 427 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMGA1-205ENST00000447654 BRWD1Q9NSI6 2320 aa17.14■□□□□ 0.34
HMGA1-205ENST00000447654 A0A1W2PP55 124 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 B4DEV8 164 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 LDLRAD4O15165 306 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 RPP14O95059 124 aaKnown RBP17.14■□□□□ 0.33
HMGA1-205ENST00000447654 RPLP1P05386 114 aaKnown RBP17.14■□□□□ 0.33
HMGA1-205ENST00000447654 NID1P14543 1247 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 TAGLN2P37802 199 aaKnown RBP17.14■□□□□ 0.33
HMGA1-205ENST00000447654 MC3RP41968 323 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 GLIPR1P48060 266 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 NPY4RP50391 375 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 ERVFC1-1P60608 527 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 EIF2B1Q14232 305 aaKnown RBP17.14■□□□□ 0.33
HMGA1-205ENST00000447654 ARHGAP19Q14CB8 494 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 OR8G5Q8NG78 346 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 OR4K15Q8NH41 348 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 ABHD5Q8WTS1 349 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 ROBO4Q8WZ75 1007 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 OR2M4Q96R27 311 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 ENTPD2Q9Y5L3 495 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 IER3IP1Q9Y5U9 82 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 HEATR5BQ9P2D3 2071 aa17.14■□□□□ 0.33
HMGA1-205ENST00000447654 TP53I11O14683 189 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 CYB5BO43169 146 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 IL18BPO95998 194 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 FOLR1P15328 257 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 RPL12P30050 165 aaKnown RBP17.13■□□□□ 0.33
HMGA1-205ENST00000447654 CAMLGP49069 296 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 H3F3AP84243 136 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 RAB32Q13637 225 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 CST6Q15828 149 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 TMEM31Q5JXX7 168 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 LINC01590Q5TEZ4 76 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 MFSD12Q6NUT3 480 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 FDX2Q6P4F2 183 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF619Q8N2I2 560 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 PLPP5Q8NEB5 264 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 OR6K6Q8NGW6 343 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 FAM174AQ8TBP5 190 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 NKX2-4Q9H2Z4 354 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 RIMS4Q9H426 269 aaPredicted RBP17.13■□□□□ 0.33
HMGA1-205ENST00000447654 CES1P1Q9UKY3 287 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 HS3ST3B1Q9Y662 390 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 LNP1A1A4G5 178 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 IFNA6P05013 189 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 ERGP11308 486 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 GDI1P31150 447 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 SLC25A1P53007 311 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 SEC13P55735 322 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 EGR3Q06889 387 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 METRNLQ641Q3 311 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 SLC48A1Q6P1K1 146 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 LEG1Q6P5S2 330 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 OR52E1Q8NGJ3 308 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 FRZBQ92765 325 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 ANKRD9Q96BM1 317 aaPredicted RBP17.13■□□□□ 0.33
HMGA1-205ENST00000447654 ADAD1Q96M93 576 aaKnown RBP17.13■□□□□ 0.33
HMGA1-205ENST00000447654 TAC3Q9UHF0 121 aa17.13■□□□□ 0.33
HMGA1-205ENST00000447654 H3BQ15 152 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 K7EPK0 472 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 TK1P04183 234 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 CSN2P05814 226 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 QDPRP09417 244 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF616Q08AN1 781 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 COA6Q5JTJ3 125 aaKnown RBP17.12■□□□□ 0.33
HMGA1-205ENST00000447654 FAM71E2Q8N5Q1 922 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 AMER3Q8N944 861 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 OR14K1Q8NGZ2 314 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 POC1BQ8TC44 478 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 RAB39BQ96DA2 213 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 GPR87Q9BY21 358 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 PLEKHA2Q9HB19 425 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 TMEM242Q9NWH2 141 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 FBXL17Q9UF56 701 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 DKKL1Q9UK85 242 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 A0A0B4J2E0 115 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 A0A1B0GX12 115 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ELOA3DA6NLF2 546 aaPredicted RBP17.12■□□□□ 0.33
HMGA1-205ENST00000447654 TMEM210A6NLX4 147 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 NME2P1O60361 137 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 SCGNO76038 276 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ERVFRD-1P60508 538 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 UBE2KP61086 200 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 DUSP2Q05923 314 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ODF4Q2M2E3 257 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ELOA3BQ3SY89 546 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 MRPL2Q5T653 305 aaKnown RBP17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ABLIM2Q6H8Q1 611 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF573Q86YE8 665 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ELOA3Q8NG57 546 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 OR4S1Q8NGB4 309 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 MFSD8Q8NHS3 518 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ZNRF4Q8WWF5 429 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms