RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 OR2I1PQ8NGU4 316 aa10.59□□□□□ -0.71
MSH6-204ENST00000445503 FNDC9Q8TBE3 224 aa10.59□□□□□ -0.71
MSH6-204ENST00000445503 ARHGAP5-AS1Q96IT6 56 aa10.59□□□□□ -0.71
MSH6-204ENST00000445503 ZNF700Q9H0M5 742 aa10.59□□□□□ -0.71
MSH6-204ENST00000445503 RGCCQ9H4X1 137 aa10.59□□□□□ -0.71
MSH6-204ENST00000445503 SLC5A6Q9Y289 635 aa10.59□□□□□ -0.71
MSH6-204ENST00000445503 NUDT21O43809 227 aaKnown RBP10.58□□□□□ -0.71
MSH6-204ENST00000445503 ZNF205O95201 554 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 TSPAN15O95858 294 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 CCNOP22674 350 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 ZNF121P58317 390 aaPredicted RBP10.58□□□□□ -0.71
MSH6-204ENST00000445503 RNF4P78317 190 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 C14orf28Q4W4Y0 310 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 SULF2Q8IWU5 870 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 OR56B1Q8NGI3 324 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 OR1N1Q8NGS0 311 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 SULT4A1Q9BR01 284 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 OR10A2Q9H208 303 aa10.58□□□□□ -0.71
MSH6-204ENST00000445503 IGLV1-36A0A0B4J1U3 117 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 FAM221AA4D161 298 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 A8MXK9 166 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 NPIPA2E9PIF3 369 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 NPIPA3F8WFD2 350 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 SCGNO76038 276 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 QDPRP09417 244 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 MPGP29372 298 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 CX3CR1P49238 355 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 PEA15Q15121 130 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 ADAM19Q9H013 955 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 WDR13Q9H1Z4 485 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 KCNK7Q9Y2U2 307 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.58□□□□□ -0.72
MSH6-204ENST00000445503 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.58□□□□□ -0.72
MSH6-204ENST00000445503 A0A1B0GX78 115 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 K7EPK0 472 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 WISP1O95388 367 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 ZNF14P17017 642 aaPredicted RBP10.58□□□□□ -0.72
MSH6-204ENST00000445503 PLEKHN1Q494U1 663 aaPredicted RBP10.58□□□□□ -0.72
MSH6-204ENST00000445503 SGPP2Q8IWX5 399 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 FAM71E2Q8N5Q1 922 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 TMEM156Q8N614 296 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 SLC26A10Q8NG04 563 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 ZNF721Q8TF20 911 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 KCNIP3Q9Y2W7 256 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 LRP3O75074 770 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 DDAH2O95865 285 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 GP1BAP07359 652 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 BCKDHBP21953 392 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 LAP3P28838 519 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 OPRM1P35372 400 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 CLEC9AQ6UXN8 241 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 MEX3BQ6ZN04 569 aaKnown RBP10.58□□□□□ -0.72
MSH6-204ENST00000445503 SLC25A42Q86VD7 318 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 DMRTA2Q96SC8 542 aa10.58□□□□□ -0.72
MSH6-204ENST00000445503 MED19A0JLT2 244 aaPredicted RBP10.57□□□□□ -0.72
MSH6-204ENST00000445503 TMEM218A2RU14 115 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 CHRM2P08172 466 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 ICAM2P13598 275 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 CAMLGP49069 296 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 LY6G6FQ5SQ64 297 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 JMJD6Q6NYC1 403 aaPredicted RBP10.57□□□□□ -0.72
MSH6-204ENST00000445503 RAB11FIP2Q7L804 512 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 TMEM104Q8NE00 496 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 OR10Z1Q8NGY1 313 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 SLC22A8Q8TCC7 542 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 LIN37Q96GY3 246 aaPredicted RBP10.57□□□□□ -0.72
MSH6-204ENST00000445503 ALX4Q9H161 411 aaPredicted RBP10.57□□□□□ -0.72
MSH6-204ENST00000445503 FLI1Q01543 452 aaPredicted RBP10.57□□□□□ -0.72
MSH6-204ENST00000445503 RAB32Q13637 225 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 RSU1Q15404 277 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 FAM189A2Q15884 450 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 ALKBH2Q6NS38 261 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 AHCTF1Q8WYP5 2266 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 IGHV3-15A0A0B4J1V0 119 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 IGKV1D-43A0A0B4J1Z2 117 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 RAB27BO00194 218 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 CCR5P51681 352 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 TMPPEQ6ZT21 453 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 OR5L2Q8NGL0 311 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 OR6C1Q96RD1 312 aa10.57□□□□□ -0.72
MSH6-204ENST00000445503 ZNF217O75362 1048 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 BPNT1O95861 308 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 CRHP06850 196 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 RAB5BP61020 215 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 MYBPHQ13203 477 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 PHLDA2Q53GA4 152 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 TMEM128Q5BJH2 165 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 BIVMQ86UB2 503 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 MESP1Q9BRJ9 268 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 LANCL2Q9NS86 450 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 BET1O15155 118 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 LCATP04180 440 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 CSNK1A1P48729 337 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 RAB30Q15771 203 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 MICBQ29980 383 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 SP6Q3SY56 376 aa10.56□□□□□ -0.72
MSH6-204ENST00000445503 PUSL1Q8N0Z8 303 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms