RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 WDFY2Q96P53 400 aa12.8□□□□□ -0.36
SEC13-213ENST00000445064 CHIAQ9BZP6 476 aa12.8□□□□□ -0.36
SEC13-213ENST00000445064 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
SEC13-213ENST00000445064 IL1RAPQ9NPH3 570 aa12.8□□□□□ -0.36
SEC13-213ENST00000445064 NOX4Q9NPH5 578 aa12.8□□□□□ -0.36
SEC13-213ENST00000445064 CENPMQ9NSP4 180 aa12.8□□□□□ -0.36
SEC13-213ENST00000445064 C1RLQ9NZP8 487 aa12.8□□□□□ -0.36
SEC13-213ENST00000445064 NOP16Q9Y3C1 178 aaKnown RBP12.8□□□□□ -0.36
SEC13-213ENST00000445064 TRAV38-1A0A0B4J264 116 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 ARPC2O15144 300 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 FCN3O75636 299 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 KNG1P01042 644 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 GASTP01350 101 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 MELTFP08582 738 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 MMP9P14780 707 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 ARF6P62330 175 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 RELBQ01201 579 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 TAF13Q15543 124 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 GCSAMQ8N6F7 178 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 PNLDC1Q8NA58 520 aaKnown RBP12.79□□□□□ -0.36
SEC13-213ENST00000445064 ZNF511Q8NB15 262 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 SLC37A3Q8NCC5 494 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 OR9Q2Q8NGE9 314 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 SLAMF6Q96DU3 332 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 FAM71F1Q96KD3 344 aaPredicted RBP12.79□□□□□ -0.36
SEC13-213ENST00000445064 COPS4Q9BT78 406 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 BEX1Q9HBH7 125 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 MRPL15Q9P015 296 aaKnown RBP12.79□□□□□ -0.36
SEC13-213ENST00000445064 CDH10Q9Y6N8 788 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 MGAM2Q2M2H8 2515 aa12.79□□□□□ -0.36
SEC13-213ENST00000445064 IGHV3OR15-7A0A075B7D8 119 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 hCG_1807616A0A1W2PRN6 198 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 A6NLC8 198 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 TNFRSF11BO00300 401 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 ZNF593O00488 134 aaPredicted RBP12.78□□□□□ -0.36
SEC13-213ENST00000445064 DVL1O14640 695 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 NDUFA2O43678 99 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 GYPBP06028 91 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 SPARCP09486 303 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 FMO3P31513 532 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 HMGA2P52926 109 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 RAG2P55895 527 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 PPP1R8Q12972 351 aaKnown RBP12.78□□□□□ -0.36
SEC13-213ENST00000445064 SAMD4BQ5PRF9 694 aaKnown RBP12.78□□□□□ -0.36
SEC13-213ENST00000445064 METTL11BQ5VVY1 283 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 RPL13AP3Q6NVV1 102 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 BTN2A1Q7KYR7 527 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 PGAM4Q8N0Y7 254 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 SPERTQ8NA61 448 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 OR56B2PQ8NGI1 322 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 OR8D4Q8NGM9 314 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 OR4F5Q8NH21 305 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 GATAD2BQ8WXI9 593 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 LHX4Q969G2 390 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 KCNJ15Q99712 375 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 BTBD10Q9BSF8 475 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 MED4Q9NPJ6 270 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 TRIM36Q9NQ86 728 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 ACOXLQ9NUZ1 547 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 IL20Q9NYY1 176 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 PDP1Q9P0J1 537 aaPredicted RBP12.78□□□□□ -0.36
SEC13-213ENST00000445064 KIF17Q9P2E2 1029 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 COMMD3-BMI1R4GMX3 469 aa12.78□□□□□ -0.36
SEC13-213ENST00000445064 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.77□□□□□ -0.37
SEC13-213ENST00000445064 A0A1B0GUS0 222 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 KRT36O76013 467 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 LHBP01229 141 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 CLUP10909 449 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 ENTPD1P49961 510 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 PDLIM3Q53GG5 364 aaPredicted RBP12.77□□□□□ -0.37
SEC13-213ENST00000445064 OLFML2AQ68BL7 652 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 C17orf107Q6ZR85 190 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 C11orf53Q8IXP5 236 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 PDZD9Q8IXQ8 264 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 FGFRL1Q8N441 504 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 WFDC12Q8WWY7 111 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 C14orf119Q9NWQ9 140 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 LYVE1Q9Y5Y7 322 aa12.77□□□□□ -0.37
SEC13-213ENST00000445064 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 TBX1O43435 398 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 SNX3O60493 162 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 ELF3P78545 371 aaPredicted RBP12.76□□□□□ -0.37
SEC13-213ENST00000445064 CRMP1Q14194 572 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 PDCD1Q15116 288 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 PCK2Q16822 640 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 ZNF770Q6IQ21 691 aaPredicted RBP12.76□□□□□ -0.37
SEC13-213ENST00000445064 RASSF6Q6ZTQ3 369 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 TMEM86BQ8N661 226 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 OR8S1Q8NH09 359 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 TBC1D15Q8TC07 691 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 TSSK6Q9BXA6 273 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 TRIM15Q9C019 465 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
SEC13-213ENST00000445064 CNTD2Q9H8S5 307 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms