RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 EXD3Q8N9H8 876 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 EDEM2Q9BV94 578 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 GCM2O75603 506 aaPredicted RBP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 GLSO94925 669 aaPredicted RBP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 MPZL1O95297 269 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 C22orf15Q8WYQ4 148 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 INTS12Q96CB8 462 aaKnown RBP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 FOXJ3Q9UPW0 622 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 FLVCR1Q9Y5Y0 555 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 PUS1Q9Y606 427 aaKnown RBP eCLIP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 IGHV4-34P06331 123 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 RPP30P78346 268 aaKnown RBP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 S100A12P80511 92 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 DMKNQ6E0U4 476 aaPredicted RBP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 PARP12Q9H0J9 701 aaKnown RBP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 EXOSC3Q9NQT5 275 aaKnown RBP20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 TMEM100Q9NV29 134 aa20.11■□□□□ 0.81
CTDSPL-206ENST00000443503 TDRD6O60522 2096 aaKnown RBP20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 OR6C65A6NJZ3 312 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 GSTP1P09211 210 aaKnown RBP20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 RBPJQ06330 500 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 FUT7Q11130 342 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 C17orf107Q6ZR85 190 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 FOXB1Q99853 325 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 MYO16Q9Y6X6 1858 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 RIF1Q5UIP0 2472 aaKnown RBP20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 XRCC2O43543 280 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 CT45A8P0DMV1 189 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 CT45A9P0DMV2 189 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 CT45A2Q5DJT8 189 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 OR11L1Q8NGX0 322 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 SMOC1Q9H4F8 434 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 TMEM9BQ9NQ34 198 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 HAO2Q9NYQ3 351 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 ST3GAL6Q9Y274 331 aa20.1■□□□□ 0.81
CTDSPL-206ENST00000443503 SLC37A1P57057 533 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 IRF3Q14653 427 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 ATG4DQ86TL0 474 aaPredicted RBP20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 TMED6Q8WW62 240 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 WDR89Q96FK6 387 aaPredicted RBP20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 KCNJ15Q99712 375 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 DTX4Q9Y2E6 619 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 OR6C6A6NF89 314 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 FOXS1O43638 330 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 RAB4BP61018 213 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 OR10J5Q8NHC4 309 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 PRMT8Q9NR22 394 aaPredicted RBP20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 OR2F2O95006 317 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 EPPINO95925 133 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 TBPP20226 339 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 OR2F1Q13607 317 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 OR52W1Q6IF63 320 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 ACOT7LQ6ZUV0 252 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 TCTE3Q8IZS6 198 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 NPEPL1Q8NDH3 523 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 RTL8AQ9BWD3 113 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 PLPP3O14495 311 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 HBG1P69891 147 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 HBG2P69892 147 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 FZD5Q13467 585 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 ATPAF1Q5TC12 328 aaPredicted RBP20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 DHRS13Q6UX07 377 aa20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 MRM2Q9UI43 246 aaKnown RBP20.09■□□□□ 0.81
CTDSPL-206ENST00000443503 TOR1AO14656 332 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 IGHA1P01876 353 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 FAM157BP0CG42 384 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 AKR1C1Q04828 323 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 EXOSC2Q13868 293 aaKnown RBP20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 ZNF266Q14584 549 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 LHFPL2Q6ZUX7 228 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 PLA2G3Q9NZ20 509 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 PCDHB10Q9UN67 800 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 TIMM8BQ9Y5J9 83 aaPredicted RBP20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 MTCH2Q9Y6C9 303 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 ERGP11308 486 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 PRSS53Q2L4Q9 553 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 ANKRD16Q6P6B7 361 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 VASH2Q86V25 355 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 RELL2Q8NC24 303 aaPredicted RBP20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 PP6455Q8WZ26 134 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 HAS2Q92819 552 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 UPRTQ96BW1 309 aa20.08■□□□□ 0.81
CTDSPL-206ENST00000443503 H7C1Q1 480 aa20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 WDR1O75083 606 aa20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 FCGR2CP31995 323 aa20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 MPLP40238 635 aa20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 NKX2-1P43699 371 aaPredicted RBP20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 HAAOP46952 286 aa20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 INSM1Q01101 510 aaPredicted RBP20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 OR4D9Q8NGE8 314 aa20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 MARC2Q969Z3 335 aa20.08■□□□□ 0.8
CTDSPL-206ENST00000443503 SNCAP37840 140 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 DEGS2Q6QHC5 323 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 RNF32Q9H0A6 362 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 LHX9Q9NQ69 397 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 PLXNA1Q9UIW2 1896 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 TRA2AQ13595 282 aaKnown RBP eCLIP20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 OR8G1Q15617 311 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 PLEKHF2Q9H8W4 249 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 C12orf10Q9HB07 376 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms