RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PHYHIPQ92561 330 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 NTNG2Q96CW9 530 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 C4orf45Q96LM5 186 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 LRFN5Q96NI6 719 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 GAL3ST4Q96RP7 486 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 CDC6Q99741 560 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 NICN1Q9BSH3 213 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 PTGES2Q9H7Z7 377 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 SIRT7Q9NRC8 400 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 CBLN4Q9NTU7 201 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
HDAC9-214ENST00000441542 LOC101059948A0A1B0GTJ6 334 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 OR5H15A6NDH6 313 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 OR5H1A6NKK0 313 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 B9A039 149 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 FGF17O60258 216 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 NXPH3O95157 252 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 IFNA10P01566 189 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 POU2F2P09086 479 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 PGA4P0DJD7 388 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 PGA5P0DJD9 388 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 OR3A2P47893 321 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 RAB4BP61018 213 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HNRNPKP61978 463 aaKnown RBP eCLIP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 RHEBQ15382 184 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 DHCR24Q15392 516 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 TANGO2Q6ICL3 276 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 SLC25A24Q6NUK1 477 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 SLC16A9Q7RTY1 509 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 CPEB2Q7Z5Q1 589 aaKnown RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 ADGRE4PQ86SQ3 457 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 NECAP1Q8NC96 275 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 OR52R1Q8NGF1 315 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 Q8WTZ3 238 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 EDAQ92838 391 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 CPNE4Q96A23 557 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 RNF166Q96A37 237 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 ARRDC3Q96B67 414 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 SMIM8Q96KF7 97 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 OR2M4Q96R27 311 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 MRI1Q9BV20 369 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 NUDT9Q9BW91 350 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 MRPL37Q9BZE1 423 aaKnown RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 ELL3Q9HB65 397 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 MRPS2Q9Y399 296 aaKnown RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HCFC2Q9Y5Z7 792 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 A0A1W2PP11 408 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 IGLON5A6NGN9 336 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 CLDN4O14493 209 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 RDH16O75452 317 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 DUS4LO95620 317 aaKnown RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 LRG1P02750 347 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HCKP08631 526 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 PVRP15151 417 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 CHATP28329 748 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 TACR3P29371 465 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 RUNX2Q13950 521 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 HNF4GQ14541 408 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF239Q16600 458 aaKnown RBP6.73□□□□□ -1.33
HDAC9-214ENST00000441542 PRSS54Q6PEW0 395 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 RNF144BQ7Z419 303 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 MCEMP1Q8IX19 187 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 PRSS58Q8IYP2 241 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 SLC43A2Q8N370 569 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM52Q8NDY8 209 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 OR52E1Q8NGJ3 308 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 ABHD14AQ9BUJ0 271 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF426Q9BUY5 554 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 OR11A1Q9GZK7 315 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 EGLN1Q9GZT9 426 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 SLC5A7Q9GZV3 580 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 IL21Q9HBE4 155 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 LRIT1Q9P2V4 623 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 MYO9BQ13459 2157 aa6.73□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM212A6NML5 194 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 HRKO00198 91 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SLC16A7O60669 478 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 KLF8O95600 359 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 CSTBP04080 98 aaKnown RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TRGC1P0CF51 173 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 MMP9P14780 707 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 IL2RGP31785 369 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 FHL1Q13642 323 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ZNHIT3Q15649 155 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 MLF2Q15773 248 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 PRAMEF8Q5VWM4 474 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 PRAMEF7Q5VXH5 474 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 PLXDC2Q6UX71 529 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 C19orf47Q8N9M1 422 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms