RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MIPP30301 263 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 KIR2DS4P43632 304 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 TAS2R50P59544 299 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 C1orf61Q13536 156 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 STEAP4Q687X5 459 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 MEPCEQ7L2J0 689 aaKnown RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 CIR1Q86X95 450 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 C8orf59Q8N0T1 100 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 WBP1Q96G27 269 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 RCHY1Q96PM5 261 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 RIOK2Q9BVS4 552 aaKnown RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 FAM49AQ9H0Q0 323 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 PHPT1Q9NRX4 125 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 FRRS1LQ9P0K9 344 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 TCF19Q9Y242 345 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 A0A1W2PS29 197 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 B4DGG1 531 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 C15orf65H3BRN8 121 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 SLC1A7O00341 560 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 GCSHP23434 173 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 RAB5CP51148 216 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 MRPS34P82930 218 aaKnown RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 CRYZQ08257 329 aaKnown RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 RTP5Q14D33 572 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 CCL14Q16627 93 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 OR4A47Q6IF82 309 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 Q8WTZ3 238 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 ISL2Q96A47 359 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 TIMD4Q96H15 378 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 NEDD4LQ96PU5 975 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 FAM234AQ9H0X4 552 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 SLC25A37Q9NYZ2 338 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 FLRT1Q9NZU1 646 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 TINCRA0A1B0GVN0 87 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 A0A1W2PRF3 423 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 A0A1W2PRM7 423 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 ENGP17813 658 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 PRPH2P23942 346 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 OR3A4PP47883 348 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 FAM180AQ6UWF9 173 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 ANKRD33Q7Z3H0 272 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 OR2W3Q7Z3T1 314 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 NAA40Q86UY6 237 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 NDRG1Q92597 394 aaKnown RBP9.27□□□□□ -0.93
SYNE2-206ENST00000441438 TFAP2CQ92754 450 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 OR2M2Q96R28 347 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 SAMD4AQ9UPU9 718 aaKnown RBP9.27□□□□□ -0.93
SYNE2-206ENST00000441438 SCN1AP35498 2009 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 A0A1W2PPK0 400 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 A0A1W2PRD5 423 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 A8MXK9 166 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 H3BMQ9 156 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 SLC17A3O00476 420 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 RDH16O75452 317 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF182P17025 639 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-206ENST00000441438 ALOX5APP20292 161 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 CDX1P47902 265 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-206ENST00000441438 NUDT2P50583 147 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 DLK1P80370 383 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 PAX2Q02962 417 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 ANKRD54Q6NXT1 300 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 SHFQ7M4L6 423 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 PIGZQ86VD9 579 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 FAM126BQ8IXS8 530 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 PNLDC1Q8NA58 520 aaKnown RBP9.27□□□□□ -0.93
SYNE2-206ENST00000441438 OR13G1Q8NGZ3 307 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 SPPL2BQ8TCT7 592 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 SIGLEC10Q96LC7 697 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 PEBP4Q96S96 227 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 PRO1933Q9H354 126 aa9.27□□□□□ -0.93
SYNE2-206ENST00000441438 LRP5LA4QPB2 252 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 ZBTB42B2RXF5 422 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 CD160O95971 181 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 IGHV2-5P01817 119 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 CRADDP78560 199 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 BAXQ07812 192 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 LYPLAL1Q5VWZ2 237 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 ACOT1Q86TX2 421 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 MUC15Q8N387 334 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 OR1F12Q8NHA8 337 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 HAVCR2Q8TDQ0 301 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 MOCOSQ96EN8 888 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 RAB22AQ9UL26 194 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 NUP205Q92621 2012 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 HPNP05981 417 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 XCR1P46094 333 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF121P58317 390 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-206ENST00000441438 TAS2R43P59537 309 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 PRR5P85299 388 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 GNMTQ14749 295 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 SLC10A1Q14973 349 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 FCN2Q15485 313 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 TBC1D28Q2M2D7 210 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 RABL3Q5HYI8 236 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 CPTPQ5TA50 214 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 KIRREL2Q6UWL6 708 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 C11orf42Q8N5U0 333 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms