RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 LYRM4Q9HD34 91 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 MRPS2Q9Y399 296 aaKnown RBP7.64□□□□□ -1.19
HPS4-206ENST00000439453 TIMM10BQ9Y5J6 103 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 COLEC10Q9Y6Z7 277 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 URADA6NGE7 173 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 FAM157AC9JC47 383 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 TXNDC12O95881 172 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 PNPP00491 289 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 CSTAP01040 98 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 ZNF10P21506 573 aaPredicted RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 CENPAP49450 140 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 NOVA1P51513 510 aaKnown RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 TGIF1Q15583 401 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 TRIP6Q15654 476 aaKnown RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 ZNF74Q16587 644 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 SLC22A6Q4U2R8 563 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 BTNL8Q6UX41 500 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 PRSS41Q7RTY9 318 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OTOSQ8NHW6 89 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR2A5Q96R48 311 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR8B4Q96RC9 309 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 SPENQ96T58 3664 aaKnown RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 WIPF3A6NGB9 483 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 NPIPB9F8W1W9 429 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 CTSVO60911 334 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 RENP00797 406 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 TNFP01375 233 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 CD1CP29017 333 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 HRH1P35367 487 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 PMELP40967 661 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 DVL1P1P54792 670 aaPredicted RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 ACTR1AP61163 376 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 ZNHIT3Q15649 155 aaPredicted RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 USF2Q15853 346 aaPredicted RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR2B11Q5JQS5 317 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 KRBOX4Q5JUW0 171 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 EEF1A1P5Q5VTE0 462 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 PRSS54Q6PEW0 395 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 JAGN1Q8N5M9 183 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 BHLHE23Q8NDY6 225 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR5T3Q8NGG3 340 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR51A2Q8NGJ7 313 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 ASB5Q8WWX0 329 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 PATE1Q8WXA2 126 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 TSPAN32Q96QS1 320 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OCSTAMPQ9BR26 566 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 KIR3DX1Q9H7L2 352 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 FN3KRPQ9HA64 309 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR5AC2Q9NZP5 309 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 KPTNQ9Y664 436 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 SPACA6W5XKT8 324 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 A0A1W2PPH5 198 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 ZNF729A6NN14 1252 aaPredicted RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 CYR61O00622 381 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 NUDT21O43809 227 aaKnown RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 CD2P06729 351 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 SNRNP70P08621 437 aaKnown RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 FTH1P19P0C7X4 201 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 IGFBP3P17936 291 aaPredicted RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 ACKR3P25106 362 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 CLDN6P56747 220 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 ZNF260Q3ZCT1 412 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 SLC35D2Q76EJ3 337 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 RHBDD1Q8TEB9 315 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 AQP10Q96PS8 301 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR5B2Q96R09 309 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 OR2M4Q96R27 311 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 SPSB2Q99619 263 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 LMF2Q9BU23 707 aaKnown RBP7.63□□□□□ -1.19
HPS4-206ENST00000439453 TMPRSS5Q9H3S3 457 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 DMRT1Q9Y5R6 373 aa7.63□□□□□ -1.19
HPS4-206ENST00000439453 AP4M1O00189 453 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SERPINA5P05154 406 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 CD37P11049 281 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 LYL1P12980 280 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 RAB5AP20339 215 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 GLP1RP43220 463 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SPOCK1Q08629 439 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 EIF5AL1Q6IS14 154 aaKnown RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 GUSBP11Q6P575 273 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 RD3Q7Z3Z2 195 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 ZNF563Q8TA94 476 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SECTM1Q8WVN6 248 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 ISOC2Q96AB3 205 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 ZNF775Q96BV0 537 aaPredicted RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 CMBLQ96DG6 245 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SLC25A44Q96H78 314 aaPredicted RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 TAAR9Q96RI9 348 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SLC5A7Q9GZV3 580 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 PILRAQ9UKJ1 303 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 POMT1Q9Y6A1 747 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 hCG_1809904A0A1W2PP81 198 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 A0A1W2PR64 198 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 A0A1W2PRV1 198 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 C7orf77A4D0Y5 90 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 TNFSF14O43557 240 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 IFNA6P05013 189 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 GUSBP08236 651 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 RD3LP0DJH9 198 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 FSTP19883 344 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms